Aliases for ENSG00000199349 Gene

Subcategory (RNA class) for ENSG00000199349 Gene

misc_RNA

Number of RNA Genes sources:

1 / 14

Aliases for ENSG00000199349 Gene

  • RF00019 172
  • Y RNA 5
  • Y_RNA 5

External Ids for ENSG00000199349 Gene

Previous GeneCards Identifiers for ENSG00000199349 Gene

  • GC01M203310
  • GC01M204987
  • GC01M206921

Summaries for ENSG00000199349 Gene

GeneCards Summary for ENSG00000199349 Gene

ENSG00000199349 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000199349 Gene

Additional gene information for ENSG00000199349 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000199349 Gene

Genomics for ENSG00000199349 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000199349 Gene

Promoters and enhancers for ENSG00000199349 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J206748 Enhancer 0.7 FANTOM5 Ensembl 500.7 -0.7 -709 3.2 FOS CTCF NR3C1 ZFP36 RNF2 CEBPB CBX8 ENSG00000199349 MAPKAPK2 IL19 IL10 IL20 RASSF5 IKBKE LOC105372877
GH01J206744 Enhancer 1 FANTOM5 Ensembl 0.7 +3.6 3592 3.8 RBM25 CREB3L1 MAX FOSL1 ZFHX2 USF1 BCOR E2F6 BATF KLF9 MAPKAPK2 IL19 IL10 IL20 RASSF5 ENSG00000261000 DYRK3 IKBKE ENSG00000199349 NONHSAG004099.2
GH01J206734 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.2 10191 7.4 ZBTB40 CTCF SP1 PHB2 ZBTB11 AFF1 TARDBP REST HES1 MEF2C MAPKAPK2 FCMR IL19 IL10 PIGR IL20 IL24 C1orf116 DYRK3 CD55
GH01J206732 Enhancer 0.4 Ensembl 0.4 +15.2 15191 1.4 SPI1 SUPT5H ZNF48 POLR2A NONHSAG004099.2 IL19 IL10 MAPKAPK2 FCMR PIGR IL20 IL24 C1orf116 ENSG00000199349
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000199349 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000199349 Gene

Genomic Locations for ENSG00000199349 Gene
chr1:206,747,980-206,748,092
(GRCh38/hg38)
Size:
113 bases
Orientation:
Minus strand
chr1:206,921,325-206,921,437
(GRCh37/hg19)
Size:
113 bases
Orientation:
Minus strand

Genomic View for ENSG00000199349 Gene

Genes around ENSG00000199349 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000199349 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000199349 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000199349 Gene

Proteins for ENSG00000199349 Gene

Post-translational modifications for ENSG00000199349 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000199349 Gene

Domains & Families for ENSG00000199349 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000199349 Gene

Function for ENSG00000199349 Gene

Phenotypes From GWAS Catalog for ENSG00000199349 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000199349 Gene

Localization for ENSG00000199349 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000199349 Gene

Pathways & Interactions for ENSG00000199349 Gene

PathCards logo

SuperPathways for ENSG00000199349 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000199349 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000199349 Gene

Drugs & Compounds for ENSG00000199349 Gene

No Compound Related Data Available

Transcripts for ENSG00000199349 Gene

mRNA/cDNA for ENSG00000199349 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000199349 Gene

No ASD Table

Relevant External Links for ENSG00000199349 Gene

GeneLoc Exon Structure for
ENSG00000199349

Expression for ENSG00000199349 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000199349 Gene

genes like me logo Genes that share expression patterns with ENSG00000199349: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000199349 Gene

Orthologs for ENSG00000199349 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000199349 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 31
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia Y_RNA 31
  • 76 (a)
OneToMany
Species where no ortholog for ENSG00000199349 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000199349 Gene

ENSEMBL:
Gene Tree for ENSG00000199349 (if available)
TreeFam:
Gene Tree for ENSG00000199349 (if available)

Paralogs for ENSG00000199349 Gene

No data available for Paralogs for ENSG00000199349 Gene

Variants for ENSG00000199349 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000199349 Gene

Disorders for ENSG00000199349 Gene

No disorders were found for ENSG00000199349 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000199349 Gene

Publications for ENSG00000199349 Gene

No publications were found for ENSG00000199349 Gene.

No data available for Mastermind for ENSG00000199349 Gene

Products for ENSG00000199349 Gene

Sources for ENSG00000199349 Gene