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Aliases for ENSG00000197991 Gene

Aliases for ENSG00000197991 Gene

  • AL592490.1 5

External Ids for ENSG00000197991 Gene

Summaries for ENSG00000197991 Gene

GeneCards Summary for ENSG00000197991 Gene

ENSG00000197991 is a Protein Coding gene. An important paralog of this gene is PCDH20.

Additional gene information for ENSG00000197991 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000197991 Gene

Genomics for ENSG00000197991 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000197991 Gene

Promoters and enhancers for ENSG00000197991 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J061414 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 7.8 +12.5 12540 1.4 TAF1 MAX RAD21 YY1 HIC1 POLR2A ZBTB48 ZNF547 SCRT2 SP3 PCDH20 GC13M061413 ENSG00000197991 GC13P061390
GH13J061179 Enhancer 0.4 FANTOM5 ENCODE 8.7 +247.7 247710 0.7 LOC102723910 ENSG00000197991 MIR3169
GH13J061148 Enhancer 0.2 ENCODE 10.4 +278.6 278567 1.1 ENSG00000197991 LOC102723910 GC13P061044
GH13J061411 Promoter 0.5 EPDnew 0.4 +16.2 16209 0.1 PCDH20 ENSG00000197991 GC13P061390
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000197991 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000197991 Gene

Genomic Locations for ENSG00000197991 Gene
chr13:61,409,858-61,427,849
(GRCh38/hg38)
Size:
17,992 bases
Orientation:
Minus strand

Genomic View for ENSG00000197991 Gene

Genes around ENSG00000197991 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000197991 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000197991 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000197991 Gene

Proteins for ENSG00000197991 Gene

Post-translational modifications for ENSG00000197991 Gene

No Post-translational modifications

Other Protein References for ENSG00000197991 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000197991 Gene

Domains & Families for ENSG00000197991 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000197991 Gene

Function for ENSG00000197991 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000197991 Gene

Localization for ENSG00000197991 Gene

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytokinetic bridge (2)
  • Vesicles (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ENSG00000197991 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016020 membrane IEA --
genes like me logo Genes that share ontologies with ENSG00000197991: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ENSG00000197991 Gene

Pathways & Interactions for ENSG00000197991 Gene

SuperPathways for ENSG00000197991 Gene

No Data Available

Interacting Proteins for ENSG00000197991 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://version10.5.string-db.org/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000386653%0d%0a9606.ENSP00000371205%0d%0a9606.ENSP00000305595%0d%0a
Selected Interacting proteins: ENSP00000386653 for ENSG00000197991 Gene via STRING

Gene Ontology (GO) - Biological Process for ENSG00000197991 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007155 cell adhesion IEA --
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA --
genes like me logo Genes that share ontologies with ENSG00000197991: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000197991 Gene

Drugs & Compounds for ENSG00000197991 Gene

No Compound Related Data Available

Transcripts for ENSG00000197991 Gene

mRNA/cDNA for ENSG00000197991 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000197991 Gene

No ASD Table

Relevant External Links for ENSG00000197991 Gene

GeneLoc Exon Structure for
ENSG00000197991

Expression for ENSG00000197991 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000197991 Gene

Orthologs for ENSG00000197991 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000197991 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia PCDH20 34
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia PCDH20 34
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Pcdh20 34
  • 92 (a)
OneToOne
cow
(Bos Taurus)
Mammalia PCDH20 34
  • 90 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia PCDH20 34
  • 85 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia PCDH20 34
  • 80 (a)
OneToOne
chicken
(Gallus gallus)
Aves PCDH20 34
  • 80 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia PCDH20 34
  • 76 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii PCDH20 34
  • 57 (a)
OneToOne
Species where no ortholog for ENSG00000197991 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000197991 Gene

ENSEMBL:
Gene Tree for ENSG00000197991 (if available)
TreeFam:
Gene Tree for ENSG00000197991 (if available)

Paralogs for ENSG00000197991 Gene

genes like me logo Genes that share paralogs with ENSG00000197991: view

Variants for ENSG00000197991 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000197991 Gene

Disorders for ENSG00000197991 Gene

No disorders were found for ENSG00000197991 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000197991 Gene

Publications for ENSG00000197991 Gene

No publications were found for ENSG00000197991 Gene.

Products for ENSG00000197991 Gene

Sources for ENSG00000197991 Gene

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