Aliases for ENSG00000197813 Gene

Subcategory (RNA class) for ENSG00000197813 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000197813 Gene

  • Novel Transcript 5
  • NONHSAG026230.2 91
  • HSALNG0126981 164
  • Lnc-TEAD2-2 165
  • AC011450.1 5

External Ids for ENSG00000197813 Gene

Previous GeneCards Identifiers for ENSG00000197813 Gene

  • GC19M054527
  • GC19M049831

Summaries for ENSG00000197813 Gene

GeneCards Summary for ENSG00000197813 Gene

ENSG00000197813 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000197813 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000197813 Gene

Genomics for ENSG00000197813 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000197813 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J049338 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.5 507 3.4 SP1 CREB1 GATAD2A TEAD4 PRDM10 TFE3 ZNF692 BACH1 TARDBP FOXA1 ENSG00000197813 HSALNG0126983 SLC6A16 KASH5 GRWD1 AKT1S1 PRR12 NUP62 CYTH2 NONHSAG026231.2
GH19J049332 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.1 5081 5.4 SP1 IKZF1 POLR2A BACH1 ZNF143 RELA MTA1 REST SMAD5 NR2C1 CD37 NONHSAG026231.2 SLC6A16 DKKL1 KASH5 ALDH16A1 BCL2L12 FLT3LG IRF3 SNRNP70
GH19J049324 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +13.1 13095 9.4 SP1 GATAD2A CTCF PRDM10 SIX5 JUND PRDM1 ZNF143 REST IRF2 SLC6A16 piR-31199-164 KASH5 DKKL1 PTH2 PTOV1-AS2 CYTH2 PRR12 SNRNP70 ALDH16A1
GH19J049339 Enhancer 0.3 ENCODE dbSUPER 0.7 +2.3 2309 0.2 CD37 ENSG00000197813 NONHSAG026231.2 DKKL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000197813 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000197813 Gene

Genomic Locations for ENSG00000197813 Gene
chr19:49,331,525-49,340,608
(GRCh38/hg38)
Size:
9,084 bases
Orientation:
Minus strand
chr19:49,834,874-49,843,865
(GRCh37/hg19)
Size:
8,992 bases
Orientation:
Minus strand

Genomic View for ENSG00000197813 Gene

Genes around ENSG00000197813 on UCSC Golden Path with GeneCards custom track
ENSG00000197813 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000197813 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000197813 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000197813 Gene

Proteins for ENSG00000197813 Gene

Post-translational modifications for ENSG00000197813 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000197813 Gene

Domains & Families for ENSG00000197813 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000197813 Gene

Function for ENSG00000197813 Gene

Phenotypes From GWAS Catalog for ENSG00000197813 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000197813 Gene

Localization for ENSG00000197813 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000197813 Gene

Pathways & Interactions for ENSG00000197813 Gene

PathCards logo

SuperPathways for ENSG00000197813 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000197813 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000197813 Gene

Drugs & Compounds for ENSG00000197813 Gene

No Compound Related Data Available

Transcripts for ENSG00000197813 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000197813 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000006C7B0_9606 lncRNA 511 4

Ensembl: ENST00000602554 (view in UCSC) ,

LncBook: HSALNT0261294,

LNCipedia: lnc-TEAD2-2:6,

NONCODE: NONHSAT067171.2,

URS0000EF0F71_9606 lncRNA 707 1

Ensembl: ENST00000358234 (view in UCSC) ,

URS0000109ED2_9606 lncRNA 573 2

LNCipedia: lnc-TEAD2-2:5,

NONCODE: NONHSAT067172.2,

URS00002B46F5_9606 lncRNA 270 1

LNCipedia: lnc-TEAD2-2:4,

ENSG00000197813 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000197813 Gene

No ASD Table

Relevant External Links for ENSG00000197813 Gene

GeneLoc Exon Structure for
ENSG00000197813

No data available for mRNA/cDNA for ENSG00000197813 Gene

Expression for ENSG00000197813 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000197813 Gene

genes like me logo Genes that share expression patterns with ENSG00000197813: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000197813 Gene

Orthologs for ENSG00000197813 Gene

Evolution for ENSG00000197813 Gene

ENSEMBL:
Gene Tree for ENSG00000197813 (if available)
TreeFam:
Gene Tree for ENSG00000197813 (if available)

No data available for Orthologs for ENSG00000197813 Gene

Paralogs for ENSG00000197813 Gene

No data available for Paralogs for ENSG00000197813 Gene

Variants for ENSG00000197813 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000197813 Gene

Disorders for ENSG00000197813 Gene

Additional Disease Information for ENSG00000197813

No disorders were found for ENSG00000197813 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000197813 Gene

Publications for ENSG00000197813 Gene

No publications were found for ENSG00000197813 Gene.

No data available for Mastermind for ENSG00000197813 Gene

Products for ENSG00000197813 Gene

Sources for ENSG00000197813 Gene