Aliases for ENSG00000188850 Gene

Aliases for ENSG00000188850 Gene

  • Ribosomal Protein, Large, P1 (RPLP1) Pseudogene 5
  • AC114947.1 5

External Ids for ENSG00000188850 Gene

Previous GeneCards Identifiers for ENSG00000188850 Gene

  • GC05P043393

Summaries for ENSG00000188850 Gene

GeneCards Summary for ENSG00000188850 Gene

ENSG00000188850 is a Pseudogene.

Additional gene information for ENSG00000188850 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000188850 Gene

Genomics for ENSG00000188850 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000188850 Gene

Promoters and enhancers for ENSG00000188850 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J043336 Enhancer 0.8 ENCODE 500.7 +0.3 280 0.1 RBAK ZNF639 ZNF10 AFF1 ATF2 TAF9B ZNF148 ZNF585B ZNF184 TRIM24 ENSG00000188850 lnc-NIM1K-5 ZNF131 TMEM267 EEF1A1P19 AMD1P3 RPL29P12 ENSG00000249492 ENSG00000215068 ENSG00000248554
GH05J043337 Enhancer 0.5 Ensembl 0.7 +2.5 2537 1.4 SPI1 ZNF189 CEBPG ATF4 POLR2A MAX ATF3 TRIM24 ZNF770 NNT ENSG00000261604 ENSG00000188850 lnc-NIM1K-5 piR-39341-290 RF00017-4602
GH05J043347 Enhancer 0.6 ENCODE 0.4 +12.2 12247 2 TCF7 FOXA2 ZNF316 USF1 STAT1 CEBPB NR2F1 YY1 GATA4 SP1 HMGCS1 NNT piR-40497-048 ENSG00000188850 piR-38344-105 lnc-NIM1K-5 RF00017-4602
GH05J043332 Enhancer 0.2 Ensembl 0.7 -3.6 -3563 0.4 NNT NNT-AS1 ENSG00000188850 lnc-NIM1K-5 piR-52324-053 NONHSAG040311.2 RF00017-4602
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000188850 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000188850 Gene

Genomic Locations for ENSG00000188850 Gene
chr5:43,336,164-43,348,716
(GRCh38/hg38)
Size:
12,553 bases
Orientation:
Plus strand
chr5:43,336,266-43,348,818
(GRCh37/hg19)
Size:
12,553 bases
Orientation:
Plus strand

Genomic View for ENSG00000188850 Gene

Genes around ENSG00000188850 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000188850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000188850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000188850 Gene

Proteins for ENSG00000188850 Gene

Post-translational modifications for ENSG00000188850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000188850 Gene

Domains & Families for ENSG00000188850 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000188850 Gene

Function for ENSG00000188850 Gene

Phenotypes From GWAS Catalog for ENSG00000188850 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000188850 Gene

Localization for ENSG00000188850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000188850 Gene

Pathways & Interactions for ENSG00000188850 Gene

PathCards logo

SuperPathways for ENSG00000188850 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000188850 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000188850 Gene

Drugs & Compounds for ENSG00000188850 Gene

No Compound Related Data Available

Transcripts for ENSG00000188850 Gene

mRNA/cDNA for ENSG00000188850 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000188850 Gene

No ASD Table

Relevant External Links for ENSG00000188850 Gene

GeneLoc Exon Structure for
ENSG00000188850

Expression for ENSG00000188850 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000188850 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000188850 Gene

This gene is overexpressed in Testis (x14.0) and Liver (x10.2).
genes like me logo Genes that share expression patterns with ENSG00000188850: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000188850 Gene

Orthologs for ENSG00000188850 Gene

Evolution for ENSG00000188850 Gene

ENSEMBL:
Gene Tree for ENSG00000188850 (if available)
TreeFam:
Gene Tree for ENSG00000188850 (if available)

No data available for Orthologs for ENSG00000188850 Gene

Paralogs for ENSG00000188850 Gene

No data available for Paralogs for ENSG00000188850 Gene

Variants for ENSG00000188850 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000188850 Gene

Disorders for ENSG00000188850 Gene

No disorders were found for ENSG00000188850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000188850 Gene

Publications for ENSG00000188850 Gene

No publications were found for ENSG00000188850 Gene.

No data available for Mastermind for ENSG00000188850 Gene

Products for ENSG00000188850 Gene

Sources for ENSG00000188850 Gene