Aliases for ENSG00000188850 Gene

Aliases for ENSG00000188850 Gene

  • Ribosomal Protein, Large, P1 (RPLP1) Pseudogene 5
  • AC114947.1 5

External Ids for ENSG00000188850 Gene

Previous GeneCards Identifiers for ENSG00000188850 Gene

  • GC05P043393

Summaries for ENSG00000188850 Gene

GeneCards Summary for ENSG00000188850 Gene

ENSG00000188850 is a Pseudogene.

Additional gene information for ENSG00000188850 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000188850 Gene

Genomics for ENSG00000188850 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000188850 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J043336 Enhancer 0.8 ENCODE 250.7 +0.3 280 0.1 ZNF580 ATF2 ZNF10 CEBPB ZNF639 ZNF148 TAF9B ZNF585B FOSL2 ZNF146 ENSG00000188850 lnc-NIM1K-5 TMEM267 ZNF131 ENSG00000249492 EEF1A1P19 RPL29P12 AMD1P3 LOC153684 C5orf34-AS1
GH05J043337 Enhancer 0.5 Ensembl 0.7 +2.5 2537 1.4 SPI1 ZNF189 MAX POLR2A ATF4 ATF3 TRIM24 NNT ENSG00000261604 ENSG00000188850 lnc-NIM1K-5 piR-39341-290 HMGCS1 CCL28 RF00017-4148
GH05J043347 Enhancer 0.5 ENCODE 0.4 +12.2 12247 2 FOXA2 ZNF316 GATA4 CEBPB ZNF644 NR2F1 TCF7 SOX13 FOXA3 LOC107986378 HMGCS1 NNT ENSG00000188850 piR-38344-105 lnc-NIM1K-5 CCL28 RF00017-4148
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000188850 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000188850 Gene

Latest Assembly
chr5:43,336,164-43,348,716
(GRCh38/hg38)
Size:
12,553 bases
Orientation:
Plus strand

Previous Assembly
chr5:43,336,266-43,348,818
(GRCh37/hg19 by Ensembl)
Size:
12,553 bases
Orientation:
Plus strand

Genomic View for ENSG00000188850 Gene

Genes around ENSG00000188850 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000188850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000188850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000188850 Gene

Proteins for ENSG00000188850 Gene

Post-translational modifications for ENSG00000188850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000188850 Gene

Domains & Families for ENSG00000188850 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000188850 Gene

Function for ENSG00000188850 Gene

Phenotypes From GWAS Catalog for ENSG00000188850 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000188850 Gene

Localization for ENSG00000188850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000188850 Gene

Pathways & Interactions for ENSG00000188850 Gene

PathCards logo

SuperPathways for ENSG00000188850 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000188850 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000188850 Gene

Drugs & Compounds for ENSG00000188850 Gene

No Compound Related Data Available

Transcripts for ENSG00000188850 Gene

mRNA/cDNA for ENSG00000188850 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000188850 Gene

No ASD Table

Relevant External Links for ENSG00000188850 Gene

GeneLoc Exon Structure for
ENSG00000188850

Expression for ENSG00000188850 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000188850 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000188850 Gene

This gene is overexpressed in Testis (x14.0) and Liver (x10.2).
genes like me logo Genes that share expression patterns with ENSG00000188850: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000188850 Gene

Orthologs for ENSG00000188850 Gene

Evolution for ENSG00000188850 Gene

ENSEMBL:
Gene Tree for ENSG00000188850 (if available)
TreeFam:
Gene Tree for ENSG00000188850 (if available)

No data available for Orthologs for ENSG00000188850 Gene

Paralogs for ENSG00000188850 Gene

No data available for Paralogs for ENSG00000188850 Gene

Variants for ENSG00000188850 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000188850 Gene

Disorders for ENSG00000188850 Gene

No disorders were found for ENSG00000188850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000188850 Gene

Publications for ENSG00000188850 Gene

No publications were found for ENSG00000188850 Gene.

No data available for Mastermind for ENSG00000188850 Gene

Products for ENSG00000188850 Gene

Sources for ENSG00000188850 Gene