Aliases for ENSG00000184566 Gene

Subcategory (RNA class) for ENSG00000184566 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000184566 Gene

  • Novel Transcript, Antisense To LMO2 5
  • Lnc-CAPRIN1-6 168
  • HSALNG0083549 167
  • AC132216.1 5

External Ids for ENSG00000184566 Gene

Previous GeneCards Identifiers for ENSG00000184566 Gene

  • GC11P033866
  • GC11P033858
  • GC11P033902

Summaries for ENSG00000184566 Gene

GeneCards Summary for ENSG00000184566 Gene

ENSG00000184566 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000184566 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000184566 Gene

Genomics for ENSG00000184566 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000184566 Gene

Promoters and enhancers for ENSG00000184566 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J033881 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 500.7 +1.4 1399 1.3 RBM25 ZNF592 TAL1 ZFP91 ADNP POLR2A ZMYM3 GATA1 ARID1B ZNF24 ENSG00000184566 LMO2
GH11J033880 Promoter/Enhancer 0.8 Ensembl dbSUPER 500.7 -0.3 -342 0.2 ZNF639 NCOA2 ZFP91 NFATC3 ENSG00000184566 lnc-CAPRIN1-4 LMO2
GH11J033883 Enhancer 0.3 dbSUPER 500.7 +0.7 665 0.1 POLR2A IKZF1 ENSG00000184566 LMO2
GH11J033928 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 13.1 +53.0 52988 9.7 EP300 ZBTB11 AFF1 CTBP1 TAF9B ZNF341 RBM25 OSR2 HDAC3 NR2F2 LMO2 ENSG00000184566 NAT10 lnc-CAPRIN1-5 lnc-LMO2-2 piR-42491-027
GH11J033912 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 11.8 +32.1 32118 1.2 SP1 GTF2E2 JUND FOS ZNF639 EP300 ZBTB11 AFF1 TRIM28 CTBP1 LMO2 ENSG00000184566 piR-42491-027 lnc-CAPRIN1-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000184566 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000184566 Gene

Genomic Locations for ENSG00000184566 Gene
chr11:33,880,643-33,881,800
(GRCh38/hg38)
Size:
1,158 bases
Orientation:
Plus strand
chr11:33,902,189-33,903,338
(GRCh37/hg19)
Size:
1,150 bases
Orientation:
Plus strand

Genomic View for ENSG00000184566 Gene

Genes around ENSG00000184566 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000184566 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000184566 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000184566 Gene

Proteins for ENSG00000184566 Gene

Post-translational modifications for ENSG00000184566 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000184566 Gene

Domains & Families for ENSG00000184566 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000184566 Gene

Function for ENSG00000184566 Gene

Phenotypes From GWAS Catalog for ENSG00000184566 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000184566 Gene

Localization for ENSG00000184566 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000184566 Gene

Pathways & Interactions for ENSG00000184566 Gene

PathCards logo

SuperPathways for ENSG00000184566 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000184566 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000184566 Gene

Drugs & Compounds for ENSG00000184566 Gene

No Compound Related Data Available

Transcripts for ENSG00000184566 Gene

mRNA/cDNA for ENSG00000184566 Gene

2 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000184566 Gene

No ASD Table

Relevant External Links for ENSG00000184566 Gene

GeneLoc Exon Structure for
ENSG00000184566

Expression for ENSG00000184566 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000184566 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000184566 Gene

This gene is overexpressed in Whole Blood (x10.2), Brain - Caudate (basal ganglia) (x8.9), and Brain - Amygdala (x5.8).
genes like me logo Genes that share expression patterns with ENSG00000184566: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000184566 Gene

Orthologs for ENSG00000184566 Gene

Evolution for ENSG00000184566 Gene

ENSEMBL:
Gene Tree for ENSG00000184566 (if available)
TreeFam:
Gene Tree for ENSG00000184566 (if available)

No data available for Orthologs for ENSG00000184566 Gene

Paralogs for ENSG00000184566 Gene

No data available for Paralogs for ENSG00000184566 Gene

Variants for ENSG00000184566 Gene

Variation tolerance for ENSG00000184566 Gene

Gene Damage Index Score: 0.06; 1.30% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000184566 Gene

Disorders for ENSG00000184566 Gene

No disorders were found for ENSG00000184566 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000184566 Gene

Publications for ENSG00000184566 Gene

No publications were found for ENSG00000184566 Gene.

No data available for Mastermind for ENSG00000184566 Gene

Products for ENSG00000184566 Gene

Sources for ENSG00000184566 Gene