Aliases for ELOCP28 Gene

Aliases for ELOCP28 Gene

  • Elongin C Pseudogene 28 2 3 5
  • Transcription Elongation Factor B (SIII), Polypeptide 1 Pseudogene 28 2 3
  • Transcription Elongation Factor B Subunit 1 Pseudogene 28 2 3
  • Transcription Elongation Factor B (SIII), Polypeptide 1 (15kDa, Elongin C) Pseudogene 3
  • TCEB1P28 3

External Ids for ELOCP28 Gene

Previous HGNC Symbols for ELOCP28 Gene

  • TCEB1P28

Previous GeneCards Identifiers for ELOCP28 Gene

  • GC19P002558
  • GC19P002560
  • GC19P002544
  • GC19P002546
  • GC19P002548
  • GC19P002550
  • GC19P002553

Summaries for ELOCP28 Gene

GeneCards Summary for ELOCP28 Gene

ELOCP28 (Elongin C Pseudogene 28) is a Pseudogene.

Additional gene information for ELOCP28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ELOCP28 Gene

Genomics for ELOCP28 Gene

GeneHancer (GH) Regulatory Elements for ELOCP28 Gene

Promoters and enhancers for ELOCP28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J002535 Enhancer 0.8 ENCODE 750.6 -1.9 -1857 0.6 LCORL NR2F6 CREB1 MIXL1 L3MBTL2 ELF3 SP1 NCOA3 CEBPG TFE3 ELOCP28 ENSG00000267214 RF00017-2734 lnc-GADD45B-1 RF00017-2733 GNG7
GH19J002536 Enhancer 0.2 dbSUPER 750.6 -1.0 -981 0.3 ELOCP28 lnc-GADD45B-4 RF00017-2734 lnc-GADD45B-1 RF00017-2733 GNG7
GH19J001851 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.2 -679.6 -679634 15.8 ZNF785 SP1 ZBTB40 CTCF SREBF1 ZBTB6 MLX SMARCE1 POLR2A USF2 KLF16 SBNO2 CNN2 TMEM259 SF3A2 MIDN TCF3 ENSG00000267317 MED16 LOC100288123
GH19J002531 Enhancer 0.9 ENCODE dbSUPER 0.6 -4.2 -4203 3.5 ZNF280D ELF3 SP1 MAFK PRDM1 MTA1 IKZF1 ZNF512 FOXA2 PKNOX1 ZNF77 ZNF555 SF3A2 LOC100288123 LMNB2 SPPL2B AP3D1 LSM7 SCAMP4 ENSG00000267214
GH19J002522 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -13.3 -13278 2.9 SREBF1 POLR2A ZNF217 ZNF362 MYC HLF L3MBTL2 MAX ZNF121 MNT ZNF77 MEX3D ZNF555 SF3A2 TCF3 LOC100288123 GNG7 RF00017-2734 ELOCP28 lnc-GADD45B-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ELOCP28 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ELOCP28 Gene

Genomic Locations for ELOCP28 Gene
chr19:2,537,735-2,539,309
(GRCh38/hg38)
Size:
1,575 bases
Orientation:
Plus strand
chr19:2,537,733-2,539,307
(GRCh37/hg19)
Size:
1,575 bases
Orientation:
Plus strand

Genomic View for ELOCP28 Gene

Genes around ELOCP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ELOCP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ELOCP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ELOCP28 Gene

Proteins for ELOCP28 Gene

Post-translational modifications for ELOCP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ELOCP28 Gene

Domains & Families for ELOCP28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ELOCP28 Gene

Function for ELOCP28 Gene

Phenotypes From GWAS Catalog for ELOCP28 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ELOCP28 Gene

Localization for ELOCP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ELOCP28 Gene

Pathways & Interactions for ELOCP28 Gene

PathCards logo

SuperPathways for ELOCP28 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ELOCP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ELOCP28 Gene

Drugs & Compounds for ELOCP28 Gene

No Compound Related Data Available

Transcripts for ELOCP28 Gene

mRNA/cDNA for ELOCP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ELOCP28 Gene

No ASD Table

Relevant External Links for ELOCP28 Gene

GeneLoc Exon Structure for
ELOCP28
ECgene alternative splicing isoforms for
ELOCP28

Expression for ELOCP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of ELOCP28 Gene:

ELOCP28
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ELOCP28 Gene

Orthologs for ELOCP28 Gene

Evolution for ELOCP28 Gene

ENSEMBL:
Gene Tree for ELOCP28 (if available)
TreeFam:
Gene Tree for ELOCP28 (if available)

No data available for Orthologs for ELOCP28 Gene

Paralogs for ELOCP28 Gene

No data available for Paralogs for ELOCP28 Gene

Variants for ELOCP28 Gene

Additional Variant Information for ELOCP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ELOCP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ELOCP28 Gene

Disorders for ELOCP28 Gene

No disorders were found for ELOCP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ELOCP28 Gene

Publications for ELOCP28 Gene

No publications were found for ELOCP28 Gene.

No data available for External Links for ELOCP28 Gene

Products for ELOCP28 Gene

Sources for ELOCP28 Gene