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Aliases for ELOCP20 Gene
Aliases for ELOCP20 Gene
External Ids for ELOCP20 Gene
- HGNC: 38156
- NCBI Entrez Gene: 100287778
- Ensembl: ENSG00000229101
Previous HGNC Symbols for ELOCP20 Gene
- TCEB1P20
Summaries for ELOCP20 Gene
GeneCards Summary for ELOCP20 Gene
ELOCP20 (Elongin C Pseudogene 20) is a Pseudogene.
Additional gene information for ELOCP20 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ELOCP20 Gene
Genomics for ELOCP20 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ELOCP20 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J115557 | Enhancer | 0.6 | Ensembl dbSUPER | 250.7 | +1.0 | 1025 | 0.2 | ZIC2 ATF2 NFIB ZNF660 CREB1 ATF7 | ELOCP20 CNOT7P2 lnc-VANGL1-18 VANGL1 NGF | |
| GH01J115558 | Enhancer | 0.6 | Ensembl dbSUPER | 250.7 | +1.5 | 1524 | 0.4 | ZIC2 ZNF189 NFIB ZNF660 NFIC | ELOCP20 VANGL1 CNOT7P2 lnc-VANGL1-18 NGF | |
| GH01J115555 | Enhancer | 0.2 | dbSUPER | 250.7 | -1.1 | -1054 | 0.9 | ELOCP20 VANGL1 CASQ2 LOC112268287 lnc-VANGL1-18 NGF | ||
| GH01J115556 | Enhancer | 0.2 | dbSUPER | 250.7 | 0.0 | -21 | 1.1 | ELOCP20 VANGL1 LOC112268287 lnc-VANGL1-18 NGF | ||
| GH01J115544 | Enhancer | 1.2 | FANTOM5 ENCODE dbSUPER | 0.4 | -10.4 | -10449 | 2.6 | DEK ZNF217 CTCF ELF1 CEBPB CUX1 MAX EP300 ZNF341 PRDM1 | NGF LOC112268287 ELOCP20 lnc-VANGL1-18 VANGL1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ELOCP20 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ELOCP20 Gene
Latest Assembly
- chr1:115,556,676-115,557,475
- (GRCh38/hg38)
- Size:
- 800 bases
- Orientation:
- Plus strand
Previous Assembly
- chr1:116,099,297-116,099,673
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 377 bases
- Orientation:
- Plus strand
- chr1:116,099,447-116,100,096
- (GRCh37/hg19 by Ensembl)
- Size:
- 650 bases
- Orientation:
- Plus strand
Genomic View for ELOCP20 Gene
Genes around ELOCP20 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p13.1 by HGNC
- 1p13.1 by Entrez Gene
- 1p13.1 by Ensembl
ELOCP20 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ELOCP20 Gene
Proteins for ELOCP20 Gene
Post-translational modifications for ELOCP20 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ELOCP20
- Origene Custom Protein Services for ELOCP20
Assay products for research
No data available for DME Specific Peptides for ELOCP20 Gene
Domains & Families for ELOCP20 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ELOCP20 Gene
Function for ELOCP20 Gene
Phenotypes From GWAS Catalog for ELOCP20 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ELOCP20 - Starting at $85 >
- * ELOCP20 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ELOCP20
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for ELOCP20 - Starting at $45 >
- * ELOCP20 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ELOCP20 Gene
Localization for ELOCP20 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ELOCP20 Gene
Transcripts for ELOCP20 Gene
mRNA/cDNA for ELOCP20 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000422460 345 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ELOCP20 - Starting at $85 >
- * ELOCP20 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ELOCP20
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for ELOCP20 - Starting at $45 >
- * ELOCP20 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for ELOCP20 Gene
- GeneLoc Exon Structure for
- ELOCP20
Expression for ELOCP20 Gene
No Expression Related Data Available
Primer products for research
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ELOCP20 Gene
Orthologs for ELOCP20 Gene
No data available for Orthologs for ELOCP20 Gene
Paralogs for ELOCP20 Gene
No data available for Paralogs for ELOCP20 Gene
Variants for ELOCP20 Gene
Additional Variant Information for ELOCP20 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ELOCP20
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ELOCP20 Gene
Disorders for ELOCP20 Gene
No disorders were found for ELOCP20 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ELOCP20 Gene
Publications for ELOCP20 Gene
No publications were found for ELOCP20 Gene.
No data available for Mastermind for ELOCP20 Gene
Products for ELOCP20 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ELOCP20
- Origene Custom Protein Services for ELOCP20
- Browse OriGene Inhibitory RNA Products For ELOCP20
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ELOCP20
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ELOCP20
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ELOCP20
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ELOCP20
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ELOCP20
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ELOCP20
Sources for ELOCP20 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB