Aliases for ELOCP18 Gene

Aliases for ELOCP18 Gene

  • Elongin C Pseudogene 18 2 3 5
  • Transcription Elongation Factor B (SIII), Polypeptide 1 Pseudogene 18 2 3
  • Transcription Elongation Factor B Subunit 1 Pseudogene 18 2 3
  • TCEB1P18 3

External Ids for ELOCP18 Gene

Previous HGNC Symbols for ELOCP18 Gene

  • TCEB1P18

Summaries for ELOCP18 Gene

GeneCards Summary for ELOCP18 Gene

ELOCP18 (Elongin C Pseudogene 18) is a Pseudogene.

Additional gene information for ELOCP18 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ELOCP18 Gene

Genomics for ELOCP18 Gene

GeneHancer (GH) Regulatory Elements for ELOCP18 Gene

Promoters and enhancers for ELOCP18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J068375 Enhancer 0.9 FANTOM5 Ensembl ENCODE 500.7 -2.0 -1963 4.7 FOS REST JUND ZBTB48 ZNF398 JUN POLR2A ZBTB12 ZNF558 ELOCP18 lnc-RPE65-3 RPE65 WLS ENSG00000229440 lnc-RPE65-2 lnc-RPE65-4
GH01J068330 Enhancer 0.9 Ensembl ENCODE 0.3 +44.3 44266 1.8 JUND FOS ZNF639 ZNF10 ZNF662 ZEB1 OSR2 ZBTB17 ZNF184 KLF13 MIR1262 WLS piR-31199-005 ELOCP18 lnc-RPE65-3 lnc-RPE65-4
GH01J068342 Enhancer 0.8 ENCODE 0.3 +32.7 32730 0.2 ZNF217 CTCF TEAD4 ZNF639 ZNF10 REST MYC CTBP1 RAD21 TRIM22 piR-31199-005 ELOCP18 lnc-RPE65-3 lnc-RPE65-4
GH01J068347 Enhancer 0.7 Ensembl ENCODE 0.3 +28.7 28662 3.6 CTCF SMC3 SPI1 ZNF654 RAD21 ZNF146 ZNF2 ZNF660 MAFK ZNF680 RPE65 piR-31199-005 ELOCP18 lnc-RPE65-3 lnc-RPE65-4
GH01J068358 Enhancer 0.4 Ensembl 0.4 +16.9 16862 2.4 CEBPG CEBPB BCL6B ELOCP18 lnc-RPE65-3 lnc-RPE65-4 piR-31199-005
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ELOCP18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ELOCP18 Gene

Genomic Locations for ELOCP18 Gene
chr1:68,375,322-68,375,663
(GRCh38/hg38)
Size:
342 bases
Orientation:
Minus strand
chr1:68,841,005-68,841,346
(GRCh37/hg19)
Size:
342 bases
Orientation:
Minus strand

Genomic View for ELOCP18 Gene

Genes around ELOCP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ELOCP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ELOCP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ELOCP18 Gene

Proteins for ELOCP18 Gene

Post-translational modifications for ELOCP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ELOCP18 Gene

Domains & Families for ELOCP18 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ELOCP18 Gene

Function for ELOCP18 Gene

Phenotypes From GWAS Catalog for ELOCP18 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ELOCP18 Gene

Localization for ELOCP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ELOCP18 Gene

Pathways & Interactions for ELOCP18 Gene

PathCards logo

SuperPathways for ELOCP18 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ELOCP18 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ELOCP18 Gene

Drugs & Compounds for ELOCP18 Gene

No Compound Related Data Available

Transcripts for ELOCP18 Gene

mRNA/cDNA for ELOCP18 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ELOCP18 Gene

No ASD Table

Relevant External Links for ELOCP18 Gene

GeneLoc Exon Structure for
ELOCP18

Expression for ELOCP18 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ELOCP18 Gene

Orthologs for ELOCP18 Gene

Evolution for ELOCP18 Gene

ENSEMBL:
Gene Tree for ELOCP18 (if available)
TreeFam:
Gene Tree for ELOCP18 (if available)

No data available for Orthologs for ELOCP18 Gene

Paralogs for ELOCP18 Gene

No data available for Paralogs for ELOCP18 Gene

Variants for ELOCP18 Gene

Additional Variant Information for ELOCP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ELOCP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ELOCP18 Gene

Disorders for ELOCP18 Gene

No disorders were found for ELOCP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ELOCP18 Gene

Publications for ELOCP18 Gene

No publications were found for ELOCP18 Gene.

No data available for Mastermind for ELOCP18 Gene

Products for ELOCP18 Gene

Sources for ELOCP18 Gene