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Aliases for ELOBP2 Gene
Aliases for ELOBP2 Gene
- Elongin B Pseudogene 2 2 3 5
- Transcription Elongation Factor B (SIII), Polypeptide 2 (18kDa, Elongin B) Pseudogene 2 2 3
- Transcription Elongation Factor B Subunit 2 Pseudogene 2 2 3
- Transcription Elongation Factor B (SIII), Polypeptide 2 (18kD, Elongin B) Pseudogene 3
- RNA Polymerase II Transcription Factor SIII Subunit B Pseudogene 3
- Transcription Elongation Factor B Polypeptide 2 Pseudogene 3
External Ids for ELOBP2 Gene
- HGNC: 39720
- NCBI Entrez Gene: 253665
- Ensembl: ENSG00000255262
Previous HGNC Symbols for ELOBP2 Gene
- TCEB2P2
Summaries for ELOBP2 Gene
GeneCards Summary for ELOBP2 Gene
ELOBP2 (Elongin B Pseudogene 2) is a Pseudogene.
Additional gene information for ELOBP2 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ELOBP2 Gene
Genomics for ELOBP2 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ELOBP2 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J130032 | Enhancer | 0.5 | Ensembl | 250.7 | +1.2 | 1160 | 0.6 | CEBPA ATF4 CEBPG CEBPB NFIL3 HLF ATF3 | ELOBP2 APLP2 PRDM10 LINC00167 HSALNG0088190 HSALNG0088191 | |
| GH11J130034 | Enhancer | 0.3 | Ensembl | 250.7 | -1.2 | -1240 | 1 | PRDM6 ATF2 | ELOBP2 APLP2 LINC00167 PRDM10 lnc-APLP2-3 | |
| GH11J129995 | Promoter/Enhancer | 2.6 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 5.4 | +32.7 | 32748 | 9 | TBP SP1 MXD4 FEZF1 CEBPA SIX5 NR2C1 MNT IKZF1 SMAD5 | LINC00167 PRDM10 NFRKB APLP2 ELOBP2 ARHGAP32 HSALNG0088185 | |
| GH11J130036 | Enhancer | 0.9 | Ensembl ENCODE | 12 | -4.3 | -4257 | 2.2 | MAFF SAP130 FOXP1 MAFK HMG20A NFE2 RFX5 NR2F1 ZNF652 NR2F6 | ELOBP2 lnc-APLP2-3 APLP2 PRDM10 | |
| GH11J130028 | Enhancer | 0.6 | Ensembl | 12.4 | +3.8 | 3760 | 0.6 | CEBPA SAP130 BCL6 SOX5 CEBPG HNF1A SOX13 CEBPB NFIL3 GATAD2A | ELOBP2 APLP2 PRDM10 LINC00167 HSALNG0088190 HSALNG0088191 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ELOBP2 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ELOBP2 Gene
Latest Assembly
- chr11:130,032,866-130,033,261
- (GRCh38/hg38)
- Size:
- 396 bases
- Orientation:
- Minus strand
Previous Assembly
- chr11:129,902,763-129,903,156
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 394 bases
- Orientation:
- Minus strand
- chr11:129,902,759-129,903,115
- (GRCh37/hg19 by Ensembl)
- Size:
- 357 bases
- Orientation:
- Minus strand
Genomic View for ELOBP2 Gene
Genes around ELOBP2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q24.3 by HGNC
- 11q24.3 by Entrez Gene
- 11q24.3 by Ensembl
ELOBP2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ELOBP2 Gene
Proteins for ELOBP2 Gene
Post-translational modifications for ELOBP2 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ELOBP2
- Origene Custom Protein Services for ELOBP2
Assay products for research
No data available for DME Specific Peptides for ELOBP2 Gene
Domains & Families for ELOBP2 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ELOBP2 Gene
Function for ELOBP2 Gene
Phenotypes From GWAS Catalog for ELOBP2 Gene
Phenotypes for ELOBP2 Gene
- GenomeRNAi human phenotypes for ELOBP2:
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ELOBP2 - Starting at $85 >
- * ELOBP2 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ELOBP2
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for ELOBP2 - Starting at $45 >
- * ELOBP2 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ELOBP2 Gene
Localization for ELOBP2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ELOBP2 Gene
Transcripts for ELOBP2 Gene
mRNA/cDNA for ELOBP2 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000526184 355 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ELOBP2 - Starting at $85 >
- * ELOBP2 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ELOBP2
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for ELOBP2 - Starting at $45 >
- * ELOBP2 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for ELOBP2 Gene
- GeneLoc Exon Structure for
- ELOBP2
Expression for ELOBP2 Gene
No Expression Related Data Available
Primer products for research
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ELOBP2 Gene
Orthologs for ELOBP2 Gene
No data available for Orthologs for ELOBP2 Gene
Paralogs for ELOBP2 Gene
No data available for Paralogs for ELOBP2 Gene
Variants for ELOBP2 Gene
Additional Variant Information for ELOBP2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ELOBP2
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ELOBP2 Gene
Disorders for ELOBP2 Gene
Additional Disease Information for ELOBP2
No disorders were found for ELOBP2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ELOBP2 Gene
Publications for ELOBP2 Gene
- Upregulation of retinoic acid-inducible gene-I in T24 urinary bladder carcinoma cells stimulated with interferon-gamma. (PMID: 15297736) Imaizumi T … Satoh K (The Tohoku journal of experimental medicine 2004) 3
No data available for Mastermind for ELOBP2 Gene
Products for ELOBP2 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ELOBP2
- Origene Custom Protein Services for ELOBP2
- Browse OriGene Inhibitory RNA Products For ELOBP2
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ELOBP2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ELOBP2
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ELOBP2
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ELOBP2
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ELOBP2
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ELOBP2
Sources for ELOBP2 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB