Aliases for ELOBP2 Gene

Aliases for ELOBP2 Gene

  • Elongin B Pseudogene 2 2 3 5
  • Transcription Elongation Factor B (SIII), Polypeptide 2 (18kDa, Elongin B) Pseudogene 2 2 3
  • Transcription Elongation Factor B Subunit 2 Pseudogene 2 2 3
  • Transcription Elongation Factor B (SIII), Polypeptide 2 (18kD, Elongin B) Pseudogene 3
  • RNA Polymerase II Transcription Factor SIII Subunit B Pseudogene 3
  • Transcription Elongation Factor B Polypeptide 2 Pseudogene 3
  • Elongin 18 KDa Subunit Pseudogene 3
  • Rig-1 Protein - Mouse 3
  • SIII P18 Pseudogene 3
  • ELOB Pseudogene 3
  • TCEB2P2 3
  • ELOBP2 5

External Ids for ELOBP2 Gene

Previous HGNC Symbols for ELOBP2 Gene

  • TCEB2P2

Summaries for ELOBP2 Gene

GeneCards Summary for ELOBP2 Gene

ELOBP2 (Elongin B Pseudogene 2) is a Pseudogene.

Additional gene information for ELOBP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ELOBP2 Gene

Genomics for ELOBP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ELOBP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J130032 Enhancer 0.5 Ensembl 250.7 +1.2 1160 0.6 CEBPA ATF4 CEBPG CEBPB NFIL3 HLF ATF3 ELOBP2 APLP2 PRDM10 LINC00167 HSALNG0088190 HSALNG0088191
GH11J130034 Enhancer 0.3 Ensembl 250.7 -1.2 -1240 1 PRDM6 ATF2 ELOBP2 APLP2 LINC00167 PRDM10 lnc-APLP2-3
GH11J129995 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 5.4 +32.7 32748 9 TBP SP1 MXD4 FEZF1 CEBPA SIX5 NR2C1 MNT IKZF1 SMAD5 LINC00167 PRDM10 NFRKB APLP2 ELOBP2 ARHGAP32 HSALNG0088185
GH11J130036 Enhancer 0.9 Ensembl ENCODE 12 -4.3 -4257 2.2 MAFF SAP130 FOXP1 MAFK HMG20A NFE2 RFX5 NR2F1 ZNF652 NR2F6 ELOBP2 lnc-APLP2-3 APLP2 PRDM10
GH11J130028 Enhancer 0.6 Ensembl 12.4 +3.8 3760 0.6 CEBPA SAP130 BCL6 SOX5 CEBPG HNF1A SOX13 CEBPB NFIL3 GATAD2A ELOBP2 APLP2 PRDM10 LINC00167 HSALNG0088190 HSALNG0088191
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ELOBP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ELOBP2 Gene

Latest Assembly
chr11:130,032,866-130,033,261
(GRCh38/hg38)
Size:
396 bases
Orientation:
Minus strand

Previous Assembly
chr11:129,902,763-129,903,156
(GRCh37/hg19 by Entrez Gene)
Size:
394 bases
Orientation:
Minus strand

chr11:129,902,759-129,903,115
(GRCh37/hg19 by Ensembl)
Size:
357 bases
Orientation:
Minus strand

Genomic View for ELOBP2 Gene

Genes around ELOBP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ELOBP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ELOBP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ELOBP2 Gene

Proteins for ELOBP2 Gene

Post-translational modifications for ELOBP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ELOBP2 Gene

Domains & Families for ELOBP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ELOBP2 Gene

Function for ELOBP2 Gene

Phenotypes From GWAS Catalog for ELOBP2 Gene

Phenotypes for ELOBP2 Gene

genes like me logo Genes that share phenotypes with ELOBP2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ELOBP2 Gene

Localization for ELOBP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ELOBP2 Gene

Pathways & Interactions for ELOBP2 Gene

PathCards logo

SuperPathways for ELOBP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ELOBP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ELOBP2 Gene

Drugs & Compounds for ELOBP2 Gene

No Compound Related Data Available

Transcripts for ELOBP2 Gene

mRNA/cDNA for ELOBP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ELOBP2 Gene

No ASD Table

Relevant External Links for ELOBP2 Gene

GeneLoc Exon Structure for
ELOBP2

Expression for ELOBP2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ELOBP2 Gene

Orthologs for ELOBP2 Gene

Evolution for ELOBP2 Gene

ENSEMBL:
Gene Tree for ELOBP2 (if available)
TreeFam:
Gene Tree for ELOBP2 (if available)

No data available for Orthologs for ELOBP2 Gene

Paralogs for ELOBP2 Gene

No data available for Paralogs for ELOBP2 Gene

Variants for ELOBP2 Gene

Additional Variant Information for ELOBP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ELOBP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ELOBP2 Gene

Disorders for ELOBP2 Gene

Additional Disease Information for ELOBP2

No disorders were found for ELOBP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ELOBP2 Gene

Publications for ELOBP2 Gene

  1. Upregulation of retinoic acid-inducible gene-I in T24 urinary bladder carcinoma cells stimulated with interferon-gamma. (PMID: 15297736) Imaizumi T … Satoh K (The Tohoku journal of experimental medicine 2004) 3

No data available for Mastermind for ELOBP2 Gene

Products for ELOBP2 Gene

Sources for ELOBP2 Gene