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Aliases for ELMO1-AS1 Gene

Subcategory (RNA class) for ELMO1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ELMO1-AS1 Gene

  • ELMO1 Antisense RNA 1 2 3 5
  • ELMO1 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for ELMO1-AS1 Gene

Previous GeneCards Identifiers for ELMO1-AS1 Gene

  • GC07P037038

Summaries for ELMO1-AS1 Gene

GeneCards Summary for ELMO1-AS1 Gene

ELMO1-AS1 (ELMO1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ELMO1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ELMO1-AS1 Gene

Genomics for ELMO1-AS1 Gene

GeneHancer (GH) Regulatory Elements for ELMO1-AS1 Gene

Promoters and enhancers for ELMO1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J037030 Enhancer 1.4 FANTOM5 Ensembl ENCODE 11.5 +34.8 34759 3.6 PKNOX1 ATF1 FOXA2 ARID4B FEZF1 DMAP1 ETS1 ELK1 FOS DEK GC07P037031 ELMO1-AS1 MIR1200 ELMO1 AOAH RPS17P13
GH07J036969 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.4 -26.8 -26843 3.6 FOXA2 MLX ARID4B ETS1 YY1 SLC30A9 NFKBIZ RXRA SP5 ZHX2 MIR1200 ELMO1-AS1 EEPD1 PIR62652 ELMO1
GH07J036943 Enhancer 0.9 ENCODE 11.7 -52.4 -52413 2.9 FOXA2 MLX ARID4B DMAP1 YY1 RUNX3 NFKBIZ RXRA SP5 MXD4 MIR1200 ELMO1-AS1 PIR62652 ELMO1
GH07J036944 Enhancer 0.8 Ensembl ENCODE 11.7 -54.2 -54153 0.5 EED IKZF1 NBN BCL6 DPF2 ZNF24 IKZF2 SPI1 MIR1200 ELMO1-AS1 PIR62652 ELMO1
GH07J036967 Enhancer 0.8 ENCODE 11.4 -30.3 -30265 0.2 ELF3 ARID4B ZNF48 RAD21 YY1 ZNF614 ZNF143 RCOR1 MIXL1 NFKBIZ MIR1200 ELMO1-AS1 PIR62652 ELMO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ELMO1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ELMO1-AS1 Gene

Genomic Locations for ELMO1-AS1 Gene
chr7:36,997,796-37,013,630
(GRCh38/hg38)
Size:
15,835 bases
Orientation:
Plus strand
chr7:37,037,401-37,053,235
(GRCh37/hg19)
Size:
15,835 bases
Orientation:
Plus strand

Genomic View for ELMO1-AS1 Gene

Genes around ELMO1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ELMO1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ELMO1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ELMO1-AS1 Gene

Proteins for ELMO1-AS1 Gene

Post-translational modifications for ELMO1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ELMO1-AS1 Gene

Domains & Families for ELMO1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ELMO1-AS1 Gene

Function for ELMO1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ELMO1-AS1 Gene

Localization for ELMO1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ELMO1-AS1 Gene

Pathways & Interactions for ELMO1-AS1 Gene

SuperPathways for ELMO1-AS1 Gene

No Data Available

Interacting Proteins for ELMO1-AS1 Gene

Gene Ontology (GO) - Biological Process for ELMO1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ELMO1-AS1 Gene

Drugs & Compounds for ELMO1-AS1 Gene

No Compound Related Data Available

Transcripts for ELMO1-AS1 Gene

mRNA/cDNA for ELMO1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ELMO1-AS1 Gene

No ASD Table

Relevant External Links for ELMO1-AS1 Gene

GeneLoc Exon Structure for
ELMO1-AS1
ECgene alternative splicing isoforms for
ELMO1-AS1

Expression for ELMO1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ELMO1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ELMO1-AS1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.7) and Whole Blood (x4.3).
genes like me logo Genes that share expression patterns with ELMO1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ELMO1-AS1 Gene

Orthologs for ELMO1-AS1 Gene

Evolution for ELMO1-AS1 Gene

ENSEMBL:
Gene Tree for ELMO1-AS1 (if available)
TreeFam:
Gene Tree for ELMO1-AS1 (if available)

No data available for Orthologs for ELMO1-AS1 Gene

Paralogs for ELMO1-AS1 Gene

No data available for Paralogs for ELMO1-AS1 Gene

Variants for ELMO1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ELMO1-AS1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000159203 -- 36,999,840(+) G/C/T intron_variant
rs1000190548 -- 36,997,535(+) T/C upstream_transcript_variant
rs1000233632 -- 37,009,020(+) C/T intron_variant
rs1000363545 -- 37,003,281(+) G/A intron_variant
rs1000407252 -- 37,005,725(+) C/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ELMO1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1137211 CNV deletion 24896259

Additional Variant Information for ELMO1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ELMO1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ELMO1-AS1 Gene

Disorders for ELMO1-AS1 Gene

Additional Disease Information for ELMO1-AS1

No disorders were found for ELMO1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ELMO1-AS1 Gene

Publications for ELMO1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for ELMO1-AS1 Gene

Sources for ELMO1-AS1 Gene

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