Aliases for ELF3-AS1 Gene

Subcategory (RNA class) for ELF3-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for ELF3-AS1 Gene

  • ELF3 Antisense RNA 1 2 3 5
  • S-Phase Cancer-Associated Transcript 7 2 3
  • ELF3-AS1 2 170
  • HSALNG0009693 169
  • NONHSAG003943 94
  • Lnc-LMOD1-4 170
  • SCAT7 3

External Ids for ELF3-AS1 Gene

Summaries for ELF3-AS1 Gene

GeneCards Summary for ELF3-AS1 Gene

ELF3-AS1 (ELF3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ELF3-AS1 include Thyroid Cancer, Nonmedullary, 1.

Additional gene information for ELF3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ELF3-AS1 Gene

Genomics for ELF3-AS1 Gene

GeneHancer (GH) Regulatory Elements for ELF3-AS1 Gene

Promoters and enhancers for ELF3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ELF3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ELF3-AS1 Gene

Genomic Locations for ELF3-AS1 Gene
chr1:201,995,696-202,010,463
(GRCh38/hg38)
Size:
14,768 bases
Orientation:
Minus strand

Genomic View for ELF3-AS1 Gene

Genes around ELF3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ELF3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ELF3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ELF3-AS1 Gene

Proteins for ELF3-AS1 Gene

Post-translational modifications for ELF3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ELF3-AS1 Gene

Domains & Families for ELF3-AS1 Gene

Gene Families for ELF3-AS1 Gene

genes like me logo Genes that share domains with ELF3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ELF3-AS1 Gene

Function for ELF3-AS1 Gene

Phenotypes From GWAS Catalog for ELF3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ELF3-AS1 Gene

Localization for ELF3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ELF3-AS1 Gene

Pathways & Interactions for ELF3-AS1 Gene

PathCards logo

SuperPathways for ELF3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ELF3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ELF3-AS1 Gene

Drugs & Compounds for ELF3-AS1 Gene

No Compound Related Data Available

Transcripts for ELF3-AS1 Gene

mRNA/cDNA for ELF3-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(7) RNACentral transcripts :
(2) NONCODE transcripts :
(3) LNCipedia transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ELF3-AS1 Gene

No ASD Table

Relevant External Links for ELF3-AS1 Gene

GeneLoc Exon Structure for
ELF3-AS1
ECgene alternative splicing isoforms for
ELF3-AS1

Expression for ELF3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ELF3-AS1 Gene

Orthologs for ELF3-AS1 Gene

Evolution for ELF3-AS1 Gene

ENSEMBL:
Gene Tree for ELF3-AS1 (if available)
TreeFam:
Gene Tree for ELF3-AS1 (if available)

No data available for Orthologs for ELF3-AS1 Gene

Paralogs for ELF3-AS1 Gene

No data available for Paralogs for ELF3-AS1 Gene

Variants for ELF3-AS1 Gene

Sequence variations from dbSNP and Humsavar for ELF3-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000191631 -- 202,002,151(-) C/A intron_variant
rs1000617976 -- 202,009,961(-) C/T non_coding_transcript_variant
rs1000929300 -- 202,005,876(-) C/G intron_variant
rs1001307407 -- 202,000,083(-) A/T non_coding_transcript_variant
rs1001890802 -- 202,008,686(-) G/T intron_variant

Additional Variant Information for ELF3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ELF3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ELF3-AS1 Gene

Disorders for ELF3-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ELF3-AS1 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
thyroid cancer, nonmedullary, 1
  • nmtc1
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for ELF3-AS1

genes like me logo Genes that share disorders with ELF3-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ELF3-AS1 Gene

Publications for ELF3-AS1 Gene

  1. PAN-cancer analysis of S-phase enriched lncRNAs identifies oncogenic drivers and biomarkers. (PMID: 29491376) Ali MM … Kanduri C (Nature communications 2018) 2 3 56
  2. Circulating Long Non-Coding RNAs Act as Biomarkers for Predicting 131I Uptake and Mortality in Papillary Thyroid Cancer Patients with Lung Metastases. (PMID: 27997908) Qiu ZL … Luo QY (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2016) 2 3 56
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 56

Products for ELF3-AS1 Gene

Sources for ELF3-AS1 Gene