Aliases for EIF4BP2 Gene

Aliases for EIF4BP2 Gene

  • Eukaryotic Translation Initiation Factor 4B Pseudogene 2 2 3 5
  • EIF4BP2 5

External Ids for EIF4BP2 Gene

Previous GeneCards Identifiers for EIF4BP2 Gene

  • GC10P021318

Summaries for EIF4BP2 Gene

GeneCards Summary for EIF4BP2 Gene

EIF4BP2 (Eukaryotic Translation Initiation Factor 4B Pseudogene 2) is a Pseudogene.

Additional gene information for EIF4BP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for EIF4BP2 Gene

Genomics for EIF4BP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for EIF4BP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J021029 Enhancer 0.5 FANTOM5 250.7 +1.2 1189 0.4 GABPB1 FOSL2 ZBTB40 ATF3 GABPA EIF4BP2 piR-43107-033 NEBL
GH10J021028 Enhancer 0.4 FANTOM5 250.7 0.0 -48 0.1 ATF4 NR2C1 EIF4BP2 piR-33614-028 C10orf113 NEBL
GH10J021044 Enhancer 0.9 FANTOM5 0.4 +15.5 15502 0.2 NCOR1 IKZF1 NONO HES1 MNT ARNT NBN ZNF316 NFE2 PRDM10 RNU6-15P NEBL C10orf113 EIF4BP2 piR-43107-033
GH10J021045 Enhancer 0.8 Ensembl 0.4 +15.8 15818 0.4 NCOR1 IKZF1 NONO HES1 MNT ARNT NBN ZNF316 NFE2 PRDM10 RNU6-15P EIF4BP2 piR-43107-033 NEBL
GH10J021078 Enhancer 0.8 ENCODE 0.3 +49.9 49904 0.2 ZNF654 MYC IKZF1 SSRP1 ZNF10 REST BHLHE40 MNT CTCF MAX C10orf113 piR-43107-033 EIF4BP2 NEBL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EIF4BP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for EIF4BP2 Gene

Latest Assembly
chr10:21,028,983-21,030,793
(GRCh38/hg38)
Size:
1,811 bases
Orientation:
Plus strand

Previous Assembly
chr10:21,317,912-21,319,722
(GRCh37/hg19 by Entrez Gene)
Size:
1,811 bases
Orientation:
Plus strand

chr10:21,317,928-21,319,721
(GRCh37/hg19 by Ensembl)
Size:
1,794 bases
Orientation:
Plus strand

Genomic View for EIF4BP2 Gene

Genes around EIF4BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EIF4BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EIF4BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EIF4BP2 Gene

Proteins for EIF4BP2 Gene

Post-translational modifications for EIF4BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EIF4BP2 Gene

Domains & Families for EIF4BP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for EIF4BP2 Gene

Function for EIF4BP2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EIF4BP2 Gene

Localization for EIF4BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EIF4BP2 Gene

Pathways & Interactions for EIF4BP2 Gene

PathCards logo

SuperPathways for EIF4BP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for EIF4BP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for EIF4BP2 Gene

Drugs & Compounds for EIF4BP2 Gene

No Compound Related Data Available

Transcripts for EIF4BP2 Gene

mRNA/cDNA for EIF4BP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for EIF4BP2 Gene

No ASD Table

Relevant External Links for EIF4BP2 Gene

GeneLoc Exon Structure for
EIF4BP2

Expression for EIF4BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for EIF4BP2 Gene

mRNA differential expression in normal tissues according to GTEx for EIF4BP2 Gene

This gene is overexpressed in Testis (x9.3).
genes like me logo Genes that share expression patterns with EIF4BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EIF4BP2 Gene

Orthologs for EIF4BP2 Gene

Evolution for EIF4BP2 Gene

ENSEMBL:
Gene Tree for EIF4BP2 (if available)
TreeFam:
Gene Tree for EIF4BP2 (if available)
Alliance of Genome Resources:
Additional Orthologs for EIF4BP2

No data available for Orthologs for EIF4BP2 Gene

Paralogs for EIF4BP2 Gene

No data available for Paralogs for EIF4BP2 Gene

Variants for EIF4BP2 Gene

Additional Variant Information for EIF4BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EIF4BP2
Leiden Open Variation Database (LOVD)
EIF4BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EIF4BP2 Gene

Disorders for EIF4BP2 Gene

Additional Disease Information for EIF4BP2

Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for EIF4BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EIF4BP2 Gene

Publications for EIF4BP2 Gene

  1. Associations between genetic variation in RUNX1, RUNX2, RUNX3, MAPK1 and eIF4E and riskof colon and rectal cancer: additional support for a TGF-β-signaling pathway. (PMID: 21088106) Slattery ML … Wolff RK (Carcinogenesis 2011) 3

Products for EIF4BP2 Gene

Sources for EIF4BP2 Gene