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Aliases for EIF3KP2 Gene

Subcategory (RNA class) for EIF3KP2 Gene

lncRNA

Aliases for EIF3KP2 Gene

  • Eukaryotic Translation Initiation Factor 3 Subunit K Pseudogene 2 2 3 5
  • Eukaryotic Translation Initiation Factor 3, Subunit K Pseudogene 2 2

External Ids for EIF3KP2 Gene

ORGUL Members for EIF3KP2 Gene

Summaries for EIF3KP2 Gene

GeneCards Summary for EIF3KP2 Gene

EIF3KP2 (Eukaryotic Translation Initiation Factor 3 Subunit K Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for EIF3KP2 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for EIF3KP2

Additional gene information for EIF3KP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for EIF3KP2 Gene

Genomics for EIF3KP2 Gene

GeneHancer (GH) Regulatory Elements for EIF3KP2 Gene

Promoters and enhancers for EIF3KP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J024520 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.3 -33.9 -33931 2.1 HDGF FOXA2 ZFP64 ZNF133 ARID4B SIN3A YBX1 DMAP1 GLI4 ZNF2 MIR4792 THRB-AS1 EIF3KP2
GH03J024523 Enhancer 1 ENCODE dbSUPER 0.3 -31.3 -31328 2.5 FOXA2 RAD21 YY1 FOS MIXL1 DEK RXRA REST NFIL3 SP1 MIR4792 THRB-AS1 EIF3KP2
GH03J024587 Enhancer 0.7 ENCODE 0.3 +34.6 34560 5.3 MEIS2 JUN ZFHX2 CTBP1 GATA3 ZNF316 SCRT2 FOS FOSL2 MAFK GC03P024620 GC03P024619 EIF3KP2 THRB-AS1
GH03J024597 Enhancer 0.7 ENCODE 0.3 +43.4 43371 2.7 SOX13 PKNOX1 JUN SALL2 CEBPG FEZF1 ZNF384 RARA HNF4G FOS GC03P024619 GC03P024620 EIF3KP2 THRB-AS1
GH03J024550 Enhancer 0.5 ENCODE 0.4 -5.0 -5021 1.3 SCRT1 MEIS2 ZNF316 SCRT2 MAFG MAFK EIF3KP2 MIR4792 THRB-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EIF3KP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EIF3KP2 Gene

Genomic Locations for EIF3KP2 Gene
chr3:24,555,796-24,556,463
(GRCh38/hg38)
Size:
668 bases
Orientation:
Plus strand
chr3:24,597,322-24,597,950
(GRCh37/hg19)
Size:
629 bases
Orientation:
Plus strand

Genomic View for EIF3KP2 Gene

Genes around EIF3KP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EIF3KP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EIF3KP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EIF3KP2 Gene

ORGUL Member Location for EIF3KP2 Gene

ORGUL Member Location for EIF3KP2 gene

Function for EIF3KP2 Gene

Phenotypes From GWAS Catalog for EIF3KP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EIF3KP2 Gene

Localization for EIF3KP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EIF3KP2 Gene

Pathways & Interactions for EIF3KP2 Gene

SuperPathways for EIF3KP2 Gene

No Data Available

Interacting Proteins for EIF3KP2 Gene

Gene Ontology (GO) - Biological Process for EIF3KP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EIF3KP2 Gene

Drugs & Compounds for EIF3KP2 Gene

No Compound Related Data Available

Transcripts for EIF3KP2 Gene

fRNAdb Secondary structures for EIF3KP2 Gene

  • FR098185

mRNA/cDNA for EIF3KP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for EIF3KP2 Gene

No ASD Table

Relevant External Links for EIF3KP2 Gene

GeneLoc Exon Structure for
EIF3KP2
ECgene alternative splicing isoforms for
EIF3KP2

Expression for EIF3KP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EIF3KP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of EIF3KP2 Gene:

EIF3KP2
genes like me logo Genes that share expression patterns with EIF3KP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EIF3KP2 Gene

Orthologs for EIF3KP2 Gene

Evolution for EIF3KP2 Gene

ENSEMBL:
Gene Tree for EIF3KP2 (if available)
TreeFam:
Gene Tree for EIF3KP2 (if available)

No data available for Orthologs for EIF3KP2 Gene

Paralogs for EIF3KP2 Gene

No data available for Paralogs for EIF3KP2 Gene

Variants for EIF3KP2 Gene

Additional Variant Information for EIF3KP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EIF3KP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EIF3KP2 Gene

Disorders for EIF3KP2 Gene

No disorders were found for EIF3KP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for EIF3KP2 Gene

Publications for EIF3KP2 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for EIF3KP2 Gene

Sources for EIF3KP2 Gene

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