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Aliases for EIF3IP1 Gene

Aliases for EIF3IP1 Gene

  • Eukaryotic Translation Initiation Factor 3 Subunit I Pseudogene 1 2 3 5
  • Eukaryotic Translation Initiation Factor 3, Subunit I Pseudogene 1 2
  • Eukaryotic Translation Initiation Factor 3 Subunit 2 Pseudogene 3
  • RG208K23 3

External Ids for EIF3IP1 Gene

Previous GeneCards Identifiers for EIF3IP1 Gene

  • GC07M109387
  • GC07M109599
  • GC07M103967

Summaries for EIF3IP1 Gene

GeneCards Summary for EIF3IP1 Gene

EIF3IP1 (Eukaryotic Translation Initiation Factor 3 Subunit I Pseudogene 1) is a Pseudogene.

Additional gene information for EIF3IP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EIF3IP1 Gene

Genomics for EIF3IP1 Gene

GeneHancer (GH) Regulatory Elements for EIF3IP1 Gene

Promoters and enhancers for EIF3IP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J109939 Enhancer 0.2 ENCODE 0.3 +20.7 20744 0.2 EIF3IP1 LOC100128056
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EIF3IP1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the EIF3IP1 gene promoter:
  • Nkx2-5
  • AREB6
  • AML1a
  • p300
  • POU2F1
  • POU2F1a
  • ZIC2
  • Ik-3

Genomic Locations for EIF3IP1 Gene

Genomic Locations for EIF3IP1 Gene
chr7:109,959,218-109,960,213
(GRCh38/hg38)
Size:
996 bases
Orientation:
Minus strand
chr7:109,599,275-109,600,270
(GRCh37/hg19)
Size:
996 bases
Orientation:
Minus strand

Genomic View for EIF3IP1 Gene

Genes around EIF3IP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EIF3IP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EIF3IP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EIF3IP1 Gene

Function for EIF3IP1 Gene

Phenotypes From GWAS Catalog for EIF3IP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EIF3IP1 Gene

Localization for EIF3IP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EIF3IP1 Gene

Pathways & Interactions for EIF3IP1 Gene

SuperPathways for EIF3IP1 Gene

No Data Available

Interacting Proteins for EIF3IP1 Gene

Gene Ontology (GO) - Biological Process for EIF3IP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EIF3IP1 Gene

Drugs & Compounds for EIF3IP1 Gene

No Compound Related Data Available

Transcripts for EIF3IP1 Gene

mRNA/cDNA for EIF3IP1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for EIF3IP1 Gene

Eukaryotic translation initiation factor 3, subunit I pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for EIF3IP1 Gene

No ASD Table

Relevant External Links for EIF3IP1 Gene

GeneLoc Exon Structure for
EIF3IP1
ECgene alternative splicing isoforms for
EIF3IP1

Expression for EIF3IP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EIF3IP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of EIF3IP1 Gene:

EIF3IP1

SOURCE GeneReport for Unigene cluster for EIF3IP1 Gene:

Hs.535194
genes like me logo Genes that share expression patterns with EIF3IP1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EIF3IP1 Gene

Orthologs for EIF3IP1 Gene

Evolution for EIF3IP1 Gene

ENSEMBL:
Gene Tree for EIF3IP1 (if available)
TreeFam:
Gene Tree for EIF3IP1 (if available)

No data available for Orthologs for EIF3IP1 Gene

Paralogs for EIF3IP1 Gene

No data available for Paralogs for EIF3IP1 Gene

Variants for EIF3IP1 Gene

Sequence variations from dbSNP and Humsavar for EIF3IP1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1001432492 -- 109,961,328(-) A/G upstream_transcript_variant
rs1001721678 -- 109,962,110(-) T/G upstream_transcript_variant
rs1001863749 -- 109,961,564(-) A/C upstream_transcript_variant
rs1003140592 -- 109,960,509(-) A/G upstream_transcript_variant
rs1003443209 -- 109,959,118(-) A/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for EIF3IP1 Gene

Variant ID Type Subtype PubMed ID
dgv11562n54 CNV loss 21841781
dgv11563n54 CNV loss 21841781
esv2759552 CNV gain 17122850
nsv1024551 CNV loss 25217958
nsv608079 CNV gain 21841781
nsv608080 CNV gain 21841781
nsv831095 CNV gain 17160897

Additional Variant Information for EIF3IP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EIF3IP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for EIF3IP1 Gene

Disorders for EIF3IP1 Gene

Additional Disease Information for EIF3IP1

No disorders were found for EIF3IP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EIF3IP1 Gene

Publications for EIF3IP1 Gene

  1. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 44 58

Products for EIF3IP1 Gene

Sources for EIF3IP1 Gene

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