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Aliases for EIF3FP3 Gene

Aliases for EIF3FP3 Gene

  • Eukaryotic Translation Initiation Factor 3 Subunit F Pseudogene 3 2 3 5
  • Eukaryotic Translation Initiation Factor 3, Subunit F Pseudogene 3 2
  • HCG15200 3

External Ids for EIF3FP3 Gene

Previous GeneCards Identifiers for EIF3FP3 Gene

  • GC02P058334
  • GC02P058479
  • GC02P058219
  • GC02P058253
  • GC02P058254
  • GC02P058255
  • GC02P058256
  • GC02P058257
  • GC02P058258
  • GC02P058259
  • GC02P058260

Summaries for EIF3FP3 Gene

GeneCards Summary for EIF3FP3 Gene

EIF3FP3 (Eukaryotic Translation Initiation Factor 3 Subunit F Pseudogene 3) is a Pseudogene.

Additional gene information for EIF3FP3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EIF3FP3 Gene

Genomics for EIF3FP3 Gene

GeneHancer (GH) Regulatory Elements for EIF3FP3 Gene

Promoters and enhancers for EIF3FP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J058251 Promoter 0.7 Ensembl 650.7 +0.3 272 0.6 CREB1 ATF2 PIR45875 PIR53463 EIF3FP3 VRK2
GH02J057759 Enhancer 1.5 UCNEbase Ensembl ENCODE 18.5 -491.4 -491367 1.3 PKNOX1 SIN3A IRF4 ZNF48 ZNF121 ARID2 ZNF207 ZNF143 RUNX3 JUNB EIF3FP3 FANCL ACTG1P22 LOC105377628 LOC105377632
GH02J058240 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.7 -10.3 -10337 1.8 PKNOX1 SMAD1 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B CBX5 FANCL ENSG00000273063 EIF3FP3 VRK2 GC02P058072
GH02J058044 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.4 -204.7 -204706 4.5 HDGF PKNOX1 SMAD1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 VRK2 LOC105374726 FANCL EIF3FP3 GC02M057920
GH02J058112 Enhancer 1 FANTOM5 Ensembl ENCODE 11.7 -138.3 -138250 2 GTF3C2 JUND POLR3A SPI1 VRK2 EIF3FP3 GC02P058072 ENSG00000273063
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EIF3FP3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EIF3FP3 Gene

Genomic Locations for EIF3FP3 Gene
chr2:58,251,429-58,252,687
(GRCh38/hg38)
Size:
1,259 bases
Orientation:
Plus strand
chr2:58,478,564-58,479,822
(GRCh37/hg19)
Size:
1,259 bases
Orientation:
Plus strand

Genomic View for EIF3FP3 Gene

Genes around EIF3FP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EIF3FP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EIF3FP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EIF3FP3 Gene

Function for EIF3FP3 Gene

Phenotypes From GWAS Catalog for EIF3FP3 Gene

genes like me logo Genes that share phenotypes with EIF3FP3: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EIF3FP3 Gene

Localization for EIF3FP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EIF3FP3 Gene

Pathways & Interactions for EIF3FP3 Gene

SuperPathways for EIF3FP3 Gene

No Data Available

Interacting Proteins for EIF3FP3 Gene

Gene Ontology (GO) - Biological Process for EIF3FP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EIF3FP3 Gene

Drugs & Compounds for EIF3FP3 Gene

No Compound Related Data Available

Transcripts for EIF3FP3 Gene

mRNA/cDNA for EIF3FP3 Gene

(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for EIF3FP3 Gene

No ASD Table

Relevant External Links for EIF3FP3 Gene

GeneLoc Exon Structure for
EIF3FP3
ECgene alternative splicing isoforms for
EIF3FP3

Expression for EIF3FP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EIF3FP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of EIF3FP3 Gene:

EIF3FP3
genes like me logo Genes that share expression patterns with EIF3FP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EIF3FP3 Gene

Orthologs for EIF3FP3 Gene

This gene was present in the common ancestor of chordates.

Orthologs for EIF3FP3 Gene

Organism Taxonomy Gene Similarity Type Details
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.6709 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.5593 33
Species where no ortholog for EIF3FP3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for EIF3FP3 Gene

ENSEMBL:
Gene Tree for EIF3FP3 (if available)
TreeFam:
Gene Tree for EIF3FP3 (if available)

Paralogs for EIF3FP3 Gene

No data available for Paralogs for EIF3FP3 Gene

Variants for EIF3FP3 Gene

Additional Variant Information for EIF3FP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EIF3FP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EIF3FP3 Gene

Disorders for EIF3FP3 Gene

Additional Disease Information for EIF3FP3

Genetic Association Database
(GAD)

No disorders were found for EIF3FP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EIF3FP3 Gene

Publications for EIF3FP3 Gene

  1. Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs. (PMID: 20195266) Adkins DE … van den Oord EJ (Molecular psychiatry 2011) 44 58
  2. A genome-wide association study identifies three loci associated with susceptibility to uterine fibroids. (PMID: 21460842) Cha PC … Nakamura Y (Nature genetics 2011) 44 58
  3. Genetic and clinical correlates of early-outgrowth colony-forming units. (PMID: 21493818) Shaw SY … Wang TJ (Circulation. Cardiovascular genetics 2011) 44 58
  4. A genome-wide association study of DSM-IV cannabis dependence. (PMID: 21668797) Agrawal A … Bierut LJ (Addiction biology 2011) 44 58
  5. Genome-wide association study identifies variations in 6p21.3 associated with nevirapine-induced rash. (PMID: 21810746) Chantarangsu S … Nakamura Y (Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2011) 44 58

Products for EIF3FP3 Gene

Sources for EIF3FP3 Gene

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