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Aliases for EIF1B-AS1 Gene

Subcategory (RNA class) for EIF1B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for EIF1B-AS1 Gene

  • EIF1B Antisense RNA 1 2 3 5

External Ids for EIF1B-AS1 Gene

Previous GeneCards Identifiers for EIF1B-AS1 Gene

  • GC03M040216

Summaries for EIF1B-AS1 Gene

GeneCards Summary for EIF1B-AS1 Gene

EIF1B-AS1 (EIF1B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for EIF1B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EIF1B-AS1 Gene

Genomics for EIF1B-AS1 Gene

GeneHancer (GH) Regulatory Elements for EIF1B-AS1 Gene

Promoters and enhancers for EIF1B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J040308 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 650.7 -0.4 -439 2.9 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 IRF4 YY1 EIF1B EIF1B-AS1 SNORA62 ENTPD3-AS1 ZNF619 RPL14 PGAM1P3
GH03J040313 Enhancer 1 FANTOM5 ENCODE 0.7 -4.6 -4589 1.3 HNRNPUL1 TCF12 POLR2B PAF1 ZBTB11 ZNF592 MBD2 NFIC KLF16 SMARCA4 ENTPD3-AS1 RPL14 ZNF619 ENSG00000234287 EIF1B-AS1 PGAM1P3
GH03J040298 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.4 +9.8 9766 2 HDGF ATF1 ARNT YY1 POLR2B ZNF766 ARID2 FOS ATF7 KDM4B EIF1B ENTPD3-AS1 EIF1B-AS1 GC03P040264
GH03J040312 Enhancer 0.7 ENCODE 0.7 -3.1 -3097 0.2 PKNOX1 ATF1 TEAD4 TAL1 CEBPG TCF12 CTBP1 ZNF766 MTA3 NCOR1 EIF1B-AS1 PGAM1P3
GH03J040292 Enhancer 0.8 FANTOM5 0.4 +16.9 16895 0.3 HDAC1 MEIS2 PKNOX1 ATF1 ZBTB21 BACH1 SIN3A CEBPG MTA3 POLR2A ENTPD3-AS1 ENSG00000202517 EIF1B EIF1B-AS1 GC03P040264
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around EIF1B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EIF1B-AS1 Gene

Genomic Locations for EIF1B-AS1 Gene
chr3:40,173,145-40,309,698
(GRCh38/hg38)
Size:
136,554 bases
Orientation:
Minus strand
chr3:40,214,636-40,351,189
(GRCh37/hg19)

Genomic View for EIF1B-AS1 Gene

Genes around EIF1B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EIF1B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EIF1B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EIF1B-AS1 Gene

Proteins for EIF1B-AS1 Gene

Post-translational modifications for EIF1B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EIF1B-AS1 Gene

Domains & Families for EIF1B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EIF1B-AS1 Gene

Function for EIF1B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EIF1B-AS1 Gene

Localization for EIF1B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EIF1B-AS1 Gene

Pathways & Interactions for EIF1B-AS1 Gene

SuperPathways for EIF1B-AS1 Gene

No Data Available

Interacting Proteins for EIF1B-AS1 Gene

Gene Ontology (GO) - Biological Process for EIF1B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EIF1B-AS1 Gene

Drugs & Compounds for EIF1B-AS1 Gene

No Compound Related Data Available

Transcripts for EIF1B-AS1 Gene

mRNA/cDNA for EIF1B-AS1 Gene

Unigene Clusters for EIF1B-AS1 Gene

EIF1B antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for EIF1B-AS1 Gene

No ASD Table

Relevant External Links for EIF1B-AS1 Gene

GeneLoc Exon Structure for
EIF1B-AS1
ECgene alternative splicing isoforms for
EIF1B-AS1

Expression for EIF1B-AS1 Gene

SOURCE GeneReport for Unigene cluster for EIF1B-AS1 Gene:

Hs.660388
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EIF1B-AS1 Gene

Orthologs for EIF1B-AS1 Gene

Evolution for EIF1B-AS1 Gene

ENSEMBL:
Gene Tree for EIF1B-AS1 (if available)
TreeFam:
Gene Tree for EIF1B-AS1 (if available)

No data available for Orthologs for EIF1B-AS1 Gene

Paralogs for EIF1B-AS1 Gene

No data available for Paralogs for EIF1B-AS1 Gene

Variants for EIF1B-AS1 Gene

Sequence variations from dbSNP and Humsavar for EIF1B-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000008642 -- 40,306,571(-) G/A intron_variant
rs1000033379 -- 40,192,375(-) A/G intron_variant
rs1000077708 -- 40,209,425(-) A/G intron_variant
rs1000102501 -- 40,259,544(-) C/T intron_variant
rs1000106457 -- 40,192,676(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for EIF1B-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv2511n106 CNV deletion 24896259
esv1251654 CNV insertion 17803354
esv1700873 CNV insertion 17803354
esv2725186 CNV deletion 23290073
esv2725187 CNV deletion 23290073
esv3305645 CNV mobile element insertion 20981092
esv3561773 CNV deletion 23714750
nsv1129693 CNV tandem duplication 24896259
nsv1136719 CNV deletion 24896259
nsv3774 CNV deletion 18451855
nsv509823 OTHER sequence alteration 20534489
nsv512798 CNV insertion 21212237
nsv834667 CNV gain 17160897
nsv963311 CNV duplication 23825009

Additional Variant Information for EIF1B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EIF1B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for EIF1B-AS1 Gene

Disorders for EIF1B-AS1 Gene

Additional Disease Information for EIF1B-AS1

No disorders were found for EIF1B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EIF1B-AS1 Gene

Publications for EIF1B-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for EIF1B-AS1 Gene

Sources for EIF1B-AS1 Gene

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