Aliases for EHMT2-AS1 Gene

Subcategory (RNA class) for EHMT2-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for EHMT2-AS1 Gene

  • EHMT2 And SLC44A4 Antisense RNA 1 2 3 5
  • EHMT2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • EHMT2-AS1 2 5
  • EHMT2 Antisense RNA 1 2
  • NONHSAG046286.2 91
  • NONHSAG045957.2 91
  • NONHSAG045603.2 91
  • NONHSAG043523.2 91
  • NONHSAG045771.2 91
  • NONHSAG046649.2 91
  • NONHSAG046473.2 91
  • HSALNG0049343 164

External Ids for EHMT2-AS1 Gene

Previous GeneCards Identifiers for EHMT2-AS1 Gene

  • GC00U933201
  • GC06P031852
  • GC06P031866
  • GC06P031883
  • GC06P032336
  • GC06P032521
  • GC06P032626
  • GC06P033430
  • GC06P032211
  • GC06P032242

Summaries for EHMT2-AS1 Gene

GeneCards Summary for EHMT2-AS1 Gene

EHMT2-AS1 (EHMT2 And SLC44A4 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for EHMT2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for EHMT2-AS1 Gene

Genomics for EHMT2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for EHMT2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J031876 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 600.7 +0.8 830 4.2 HNRNPL GATAD2A RFX1 FOXA1 PKNOX1 PATZ1 PBX2 ZNF600 ZBTB20 SP2 SLC44A4 EHMT2-AS1 HLA-DRB5 SKIV2L HLA-DRB1 HLA-C EHMT2 VWA7 DXO HLA-DQA2
GH06J031882 Enhancer 0.5 Ensembl 0.7 +4.8 4793 0.4 ZNF692 RBFOX2 JUND PCBP1 POLR2A ZNF398 SMARCA4 EGR2 CBFA2T3 LOC107986588 SLC44A4 HLA-B EHMT2-AS1 lnc-ZBTB12-1 EHMT2 MG828730-062 RF00017-5416 RF00017-5420
GH06J031875 Enhancer 0.5 Ensembl 0.7 -2.4 -2408 1.6 FOXA1 ZNF341 CTBP1 GATA3 HDAC2 KDM1A ZEB2 CBFA2T3 ATF6B BAG6 AGER EHMT2-AS1 SLC44A4 lnc-C2-3 NEU1 MG828730-062 RF00017-5416 RF00017-5420
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EHMT2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for EHMT2-AS1 Gene

Genomic Locations for EHMT2-AS1 Gene
chr6:31,877,808-31,884,204
(GRCh38/hg38)
Size:
6,397 bases
Orientation:
Plus strand
chr6:31,851,538-31,851,831
(GRCh37/hg19)
Size:
294 bases
Orientation:
Plus strand

Genomic View for EHMT2-AS1 Gene

Genes around EHMT2-AS1 on UCSC Golden Path with GeneCards custom track
EHMT2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
EHMT2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EHMT2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for EHMT2-AS1 Gene

Proteins for EHMT2-AS1 Gene

Post-translational modifications for EHMT2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EHMT2-AS1 Gene

Domains & Families for EHMT2-AS1 Gene

Gene Families for EHMT2-AS1 Gene

genes like me logo Genes that share domains with EHMT2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for EHMT2-AS1 Gene

Function for EHMT2-AS1 Gene

Phenotypes From GWAS Catalog for EHMT2-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EHMT2-AS1 Gene

Localization for EHMT2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EHMT2-AS1 Gene

Pathways & Interactions for EHMT2-AS1 Gene

PathCards logo

SuperPathways for EHMT2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for EHMT2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for EHMT2-AS1 Gene

Drugs & Compounds for EHMT2-AS1 Gene

No Compound Related Data Available

Transcripts for EHMT2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for EHMT2-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001D1189_9606 lncRNA 223 3

Ensembl: ENST00000416010 (view in UCSC) , ENST00000419289 (view in UCSC) , ENST00000441686 (view in UCSC) , ENST00000448488 (view in UCSC) , ENST00000454059 (view in UCSC) ,

LncBook: HSALNT0104622, HSALNT0104623, HSALNT0104624, HSALNT0104625, HSALNT0104626,

NONCODE: NONHSAT108846.2, NONHSAT116446.2, NONHSAT116764.2, NONHSAT117107.2, NONHSAT117762.2,

URS0000D6435E_9606 lncRNA 2571 2

HGNC: 39751,

Ensembl: ENST00000642849 (view in UCSC) ,

URS0000811DFA_9606 lncRNA 373 2

Ensembl: ENST00000434689 (view in UCSC) ,

LncBook: HSALNT0104628,

URS00009BF3F4_9606 lncRNA 277 2

LncBook: HSALNT0104620,

NONCODE: NONHSAT207117.1,

EHMT2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for EHMT2-AS1 Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for EHMT2-AS1 Gene

No ASD Table

Relevant External Links for EHMT2-AS1 Gene

GeneLoc Exon Structure for
EHMT2-AS1

Expression for EHMT2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for EHMT2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for EHMT2-AS1 Gene

This gene is overexpressed in Colon - Transverse (x5.1) and Prostate (x4.8).
genes like me logo Genes that share expression patterns with EHMT2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EHMT2-AS1 Gene

Orthologs for EHMT2-AS1 Gene

Evolution for EHMT2-AS1 Gene

ENSEMBL:
Gene Tree for EHMT2-AS1 (if available)
TreeFam:
Gene Tree for EHMT2-AS1 (if available)

No data available for Orthologs for EHMT2-AS1 Gene

Paralogs for EHMT2-AS1 Gene

No data available for Paralogs for EHMT2-AS1 Gene

Variants for EHMT2-AS1 Gene

Additional Variant Information for EHMT2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EHMT2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EHMT2-AS1 Gene

Disorders for EHMT2-AS1 Gene

No disorders were found for EHMT2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for EHMT2-AS1 Gene

Publications for EHMT2-AS1 Gene

No publications were found for EHMT2-AS1 Gene.

Products for EHMT2-AS1 Gene

Sources for EHMT2-AS1 Gene