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Aliases for EHD4-AS1 Gene

Subcategory (RNA class) for EHD4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for EHD4-AS1 Gene

  • EHD4 Antisense RNA 1 2 3 5

External Ids for EHD4-AS1 Gene

Summaries for EHD4-AS1 Gene

GeneCards Summary for EHD4-AS1 Gene

EHD4-AS1 (EHD4 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for EHD4-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EHD4-AS1 Gene

Genomics for EHD4-AS1 Gene

GeneHancer (GH) Regulatory Elements for EHD4-AS1 Gene

Promoters and enhancers for EHD4-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J040959 Enhancer 0.7 ENCODE dbSUPER 6.1 -960.8 -960815 1.8 ZFHX2 SMARCC1 POLR2A MAX ZIC2 EGR2 ZBTB17 LOC105370789 OIP5-AS1 NDUFAF1 EHD4-AS1 SPINT1 GC15M040957
GH15J041915 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 -2.4 -2402 6.4 HDAC1 ATF1 FOXA2 ZFP64 RAD21 RARA YY1 FOS ATF7 RXRA SPTBN5 CDAN1 MGA INO80 GANC LOC105370795 LOC105370792 ENSG00000260814 EHD4 PLA2G4E-AS1
GH15J041925 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.0 7022 6.6 HDGF PKNOX1 FOXA2 SMAD1 ARID4B SIN3A FEZF1 IRF4 YY1 ZNF143 SPTBN5 EHD4 LOC105370792 PLA2G4E-AS1 JMJD7 JMJD7-PLA2G4B ENSG00000250379 MAPKBP1 PLA2G4E TYRO3
GH15J041931 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +20.2 20176 19.4 PKNOX1 SIN3A IRF4 ETS1 GATA2 ZNF207 ATF7 FOS RUNX3 DEK EHD4 LTK PLA2G4E-AS1 SPTBN5 LOC105370792 MAPKBP1 PLA2G4E RPAP1 TYRO3 OIP5
GH15J041959 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +39.6 39639 3.1 FOXA2 INSM2 RARA YY1 ZNF366 ATF7 CREM RXRA CEBPB ZEB2 PLA2G4D PLA2G4E RNU6-1169P MAPKBP1 GC15M041951 EHD4 EHD4-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around EHD4-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EHD4-AS1 Gene

Genomic Locations for EHD4-AS1 Gene
chr15:41,921,417-41,929,286
(GRCh38/hg38)
Size:
7,870 bases
Orientation:
Plus strand
chr15:42,213,615-42,221,081
(GRCh37/hg19)

Genomic View for EHD4-AS1 Gene

Genes around EHD4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EHD4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EHD4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EHD4-AS1 Gene

Function for EHD4-AS1 Gene

Phenotypes From GWAS Catalog for EHD4-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EHD4-AS1 Gene

Localization for EHD4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EHD4-AS1 Gene

Pathways & Interactions for EHD4-AS1 Gene

SuperPathways for EHD4-AS1 Gene

No Data Available

Interacting Proteins for EHD4-AS1 Gene

Gene Ontology (GO) - Biological Process for EHD4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EHD4-AS1 Gene

Drugs & Compounds for EHD4-AS1 Gene

No Compound Related Data Available

Transcripts for EHD4-AS1 Gene

mRNA/cDNA for EHD4-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for EHD4-AS1 Gene

No ASD Table

Relevant External Links for EHD4-AS1 Gene

GeneLoc Exon Structure for
EHD4-AS1
ECgene alternative splicing isoforms for
EHD4-AS1

Expression for EHD4-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EHD4-AS1 Gene

genes like me logo Genes that share expression patterns with EHD4-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EHD4-AS1 Gene

Orthologs for EHD4-AS1 Gene

Evolution for EHD4-AS1 Gene

ENSEMBL:
Gene Tree for EHD4-AS1 (if available)
TreeFam:
Gene Tree for EHD4-AS1 (if available)

No data available for Orthologs for EHD4-AS1 Gene

Paralogs for EHD4-AS1 Gene

No data available for Paralogs for EHD4-AS1 Gene

Variants for EHD4-AS1 Gene

Sequence variations from dbSNP and Humsavar for EHD4-AS1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000148727 -- 41,927,807(+) A/T intron_variant
rs1000297481 -- 41,929,578(+) G/A downstream_transcript_variant
rs1000338921 -- 41,923,640(+) T/G intron_variant
rs1000474010 -- 41,920,414(+) A/G upstream_transcript_variant
rs1000641372 -- 41,925,996(+) AACAA/AA intron_variant

Additional Variant Information for EHD4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EHD4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EHD4-AS1 Gene

Disorders for EHD4-AS1 Gene

Additional Disease Information for EHD4-AS1

No disorders were found for EHD4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EHD4-AS1 Gene

Publications for EHD4-AS1 Gene

No publications were found for EHD4-AS1 Gene.

Products for EHD4-AS1 Gene

Sources for EHD4-AS1 Gene

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