Aliases for EGID-105371807 Gene

Subcategory (RNA class) for EGID-105371807 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for EGID-105371807 Gene

  • Uncharacterized LOC105371807 3 5
  • THRA1/BTR 3 5
  • Thyroid Hormone Receptor Alpha 3
  • HSALNG0117086 167
  • NONHSAG022073 92
  • Lnc-SNX11-2 168

External Ids for EGID-105371807 Gene

Previous GeneCards Identifiers for EGID-105371807 Gene

  • GC17U902140
  • GC17P048295

Summaries for EGID-105371807 Gene

GeneCards Summary for EGID-105371807 Gene

EGID-105371807 (Uncharacterized LOC105371807) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for EGID-105371807 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for EGID-105371807 Gene

Genomics for EGID-105371807 Gene

GeneHancer (GH) Regulatory Elements for EGID-105371807 Gene

Promoters and enhancers for EGID-105371807 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EGID-105371807 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EGID-105371807 Gene

Genomic Locations for EGID-105371807 Gene
chr17:48,248,154-48,309,040
(GRCh38/hg38)
Size:
60,887 bases
Orientation:
Plus strand
chr17:46,371,709-46,386,124
(GRCh37/hg19)
Size:
14,416 bases
Orientation:
Plus strand

Genomic View for EGID-105371807 Gene

Genes around EGID-105371807 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EGID-105371807 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EGID-105371807 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EGID-105371807 Gene

Proteins for EGID-105371807 Gene

Post-translational modifications for EGID-105371807 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EGID-105371807 Gene

Domains & Families for EGID-105371807 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for EGID-105371807 Gene

Function for EGID-105371807 Gene

Phenotypes From GWAS Catalog for EGID-105371807 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EGID-105371807 Gene

Localization for EGID-105371807 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EGID-105371807 Gene

Pathways & Interactions for EGID-105371807 Gene

PathCards logo

SuperPathways for EGID-105371807 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for EGID-105371807 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for EGID-105371807 Gene

Drugs & Compounds for EGID-105371807 Gene

No Compound Related Data Available

Transcripts for EGID-105371807 Gene

mRNA/cDNA for EGID-105371807 Gene

9 RNACentral transcripts :
2 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
2 LncBook transcripts :
6 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for EGID-105371807 Gene

No ASD Table

Relevant External Links for EGID-105371807 Gene

GeneLoc Exon Structure for
EGID-105371807

Expression for EGID-105371807 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for EGID-105371807

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EGID-105371807 Gene

Orthologs for EGID-105371807 Gene

Evolution for EGID-105371807 Gene

ENSEMBL:
Gene Tree for EGID-105371807 (if available)
TreeFam:
Gene Tree for EGID-105371807 (if available)

No data available for Orthologs for EGID-105371807 Gene

Paralogs for EGID-105371807 Gene

No data available for Paralogs for EGID-105371807 Gene

Variants for EGID-105371807 Gene

Additional dbSNP identifiers (rs#s) for EGID-105371807 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for EGID-105371807 Gene

Disorders for EGID-105371807 Gene

No disorders were found for EGID-105371807 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for EGID-105371807 Gene

Publications for EGID-105371807 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  2. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 54
  3. Mutation analysis of the THRA1 gene in breast cancer: deletion/fusion of the gene to a novel sequence on 17q in the BT474 cell line. (PMID: 7511052) Futreal PA … Wiseman RW (Cancer research 1994) 3 54

No data available for Mastermind for EGID-105371807 Gene

Products for EGID-105371807 Gene

Sources for EGID-105371807 Gene