Aliases for EGFLAM-AS2 Gene

Subcategory (RNA class) for EGFLAM-AS2 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for EGFLAM-AS2 Gene

  • EGFLAM Antisense RNA 2 2 3 5
  • EGFLAM Antisense RNA 2 (Non-Protein Coding) 2 3
  • EGFLAM-AS2 2 168
  • NONHSAG040222 92
  • HSALNG0041275 167
  • CTD-2108O9.2 3

External Ids for EGFLAM-AS2 Gene

Summaries for EGFLAM-AS2 Gene

GeneCards Summary for EGFLAM-AS2 Gene

EGFLAM-AS2 (EGFLAM Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for EGFLAM-AS2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for EGFLAM-AS2 Gene

Genomics for EGFLAM-AS2 Gene

GeneHancer (GH) Regulatory Elements for EGFLAM-AS2 Gene

Promoters and enhancers for EGFLAM-AS2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EGFLAM-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EGFLAM-AS2 Gene

Genomic Locations for EGFLAM-AS2 Gene
chr5:38,399,814-38,403,471
(GRCh38/hg38)
Size:
3,658 bases
Orientation:
Minus strand
chr5:38,399,916-38,403,573
(GRCh37/hg19)
Size:
3,658 bases
Orientation:
Minus strand

Genomic View for EGFLAM-AS2 Gene

Genes around EGFLAM-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EGFLAM-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EGFLAM-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EGFLAM-AS2 Gene

Proteins for EGFLAM-AS2 Gene

Post-translational modifications for EGFLAM-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EGFLAM-AS2 Gene

Domains & Families for EGFLAM-AS2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for EGFLAM-AS2 Gene

Function for EGFLAM-AS2 Gene

Phenotypes From GWAS Catalog for EGFLAM-AS2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EGFLAM-AS2 Gene

Localization for EGFLAM-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EGFLAM-AS2 Gene

Pathways & Interactions for EGFLAM-AS2 Gene

PathCards logo

SuperPathways for EGFLAM-AS2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for EGFLAM-AS2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for EGFLAM-AS2 Gene

Drugs & Compounds for EGFLAM-AS2 Gene

No Compound Related Data Available

Transcripts for EGFLAM-AS2 Gene

mRNA/cDNA for EGFLAM-AS2 Gene

10 RNACentral transcripts :
2 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
1 LncBook transcripts :
4 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for EGFLAM-AS2 Gene

No ASD Table

Relevant External Links for EGFLAM-AS2 Gene

GeneLoc Exon Structure for
EGFLAM-AS2

Expression for EGFLAM-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for EGFLAM-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for EGFLAM-AS2 Gene

This gene is overexpressed in Testis (x52.7).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for EGFLAM-AS2

SOURCE GeneReport for Unigene cluster for EGFLAM-AS2 Gene:

Hs.662304
genes like me logo Genes that share expression patterns with EGFLAM-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EGFLAM-AS2 Gene

Orthologs for EGFLAM-AS2 Gene

Evolution for EGFLAM-AS2 Gene

ENSEMBL:
Gene Tree for EGFLAM-AS2 (if available)
TreeFam:
Gene Tree for EGFLAM-AS2 (if available)

No data available for Orthologs for EGFLAM-AS2 Gene

Paralogs for EGFLAM-AS2 Gene

No data available for Paralogs for EGFLAM-AS2 Gene

Variants for EGFLAM-AS2 Gene

Additional dbSNP identifiers (rs#s) for EGFLAM-AS2 Gene

Structural Variations from Database of Genomic Variants (DGV) for EGFLAM-AS2 Gene

Variant ID Type Subtype PubMed ID
esv3604761 CNV gain 21293372
esv3604766 CNV gain 21293372
esv3604768 CNV gain 21293372

Additional Variant Information for EGFLAM-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EGFLAM-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for EGFLAM-AS2 Gene

Disorders for EGFLAM-AS2 Gene

Additional Disease Information for EGFLAM-AS2

No disorders were found for EGFLAM-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EGFLAM-AS2 Gene

Publications for EGFLAM-AS2 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for EGFLAM-AS2 Gene

Products for EGFLAM-AS2 Gene

Sources for EGFLAM-AS2 Gene