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Aliases for EFL1P1 Gene

Aliases for EFL1P1 Gene

  • Elongation Factor Like GTPase 1 Pseudogene 1 2 3
  • Elongation Factor Tu GTP Binding Domain Containing 1 Pseudogene 1 2 3 5
  • Family With Sequence Similarity 42, Member B 2 3
  • EFTUD1P1 3 5
  • Elongation Factor Tu GTP-Binding Domain-Containing Protein 1 Pseudogene 3
  • Similar To Hypothetical Protein FLJ13119 2
  • HsT19321 3
  • FAM42B 3

External Ids for EFL1P1 Gene

Previous HGNC Symbols for EFL1P1 Gene

  • FAM42B
  • EFTUD1P1

Summaries for EFL1P1 Gene

GeneCards Summary for EFL1P1 Gene

EFL1P1 (Elongation Factor Like GTPase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for EFL1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EFL1P1 Gene

Genomics for EFL1P1 Gene

GeneHancer (GH) Regulatory Elements for EFL1P1 Gene

Promoters and enhancers for EFL1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I084079 Promoter/Enhancer 1.3 Ensembl ENCODE 550.8 -0.1 -67 1 PKNOX1 ZNF76 BMI1 ZNF335 ZNF366 SCRT2 ZBTB11 USF2 ZNF585B MYNN EFL1P1 GC15M084077 LOC642677 GOLGA6L5P WDR73 SCAND2P GOLGA6L4
GH15I084099 Enhancer 0.6 Ensembl 0.4 +19.1 19133 0.6 MEIS2 NFIC SMAD1 POLR2A NFIB IKZF1 DPF2 IKZF2 SPI1 EFL1P1 GC15M084077 DNM1P41
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around EFL1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EFL1P1 Gene

Genomic Locations for EFL1P1 Gene
chr15:84,080,168-84,126,604
(GRCh38/hg38)
Size:
46,437 bases
Orientation:
Plus strand
chr15:84,748,920-84,795,356
(GRCh37/hg19)

Genomic View for EFL1P1 Gene

Genes around EFL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EFL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EFL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EFL1P1 Gene

Proteins for EFL1P1 Gene

Post-translational modifications for EFL1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EFL1P1 Gene

Domains & Families for EFL1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for EFL1P1 Gene

Function for EFL1P1 Gene

Phenotypes From GWAS Catalog for EFL1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EFL1P1 Gene

Localization for EFL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EFL1P1 Gene

Pathways & Interactions for EFL1P1 Gene

SuperPathways for EFL1P1 Gene

No Data Available

Interacting Proteins for EFL1P1 Gene

Gene Ontology (GO) - Biological Process for EFL1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EFL1P1 Gene

Drugs & Compounds for EFL1P1 Gene

No Compound Related Data Available

Transcripts for EFL1P1 Gene

mRNA/cDNA for EFL1P1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for EFL1P1 Gene

No ASD Table

Relevant External Links for EFL1P1 Gene

GeneLoc Exon Structure for
EFL1P1
ECgene alternative splicing isoforms for
EFL1P1

Expression for EFL1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of EFL1P1 Gene:

EFL1P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EFL1P1 Gene

Orthologs for EFL1P1 Gene

Evolution for EFL1P1 Gene

ENSEMBL:
Gene Tree for EFL1P1 (if available)
TreeFam:
Gene Tree for EFL1P1 (if available)

No data available for Orthologs for EFL1P1 Gene

Paralogs for EFL1P1 Gene

No data available for Paralogs for EFL1P1 Gene

Variants for EFL1P1 Gene

Sequence variations from dbSNP and Humsavar for EFL1P1 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000118619 -- 84,092,300(+) A/T intron_variant
rs1000296567 -- 84,123,190(+) T/A intron_variant
rs1000402687 -- 84,122,603(+) G/C intron_variant
rs1000646378 -- 84,118,217(+) G/A intron_variant
rs1000712519 -- 84,117,038(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for EFL1P1 Gene

Variant ID Type Subtype PubMed ID
nsv977750 CNV duplication 23825009
nsv976960 CNV duplication 23825009
nsv974615 CNV duplication 23825009
nsv833075 CNV gain 17160897
nsv570284 CNV gain 21841781
nsv457220 CNV gain 19166990
nsv428310 CNV gain+loss 18775914
nsv1051788 CNV loss 25217958
esv3637086 CNV gain 21293372
esv33338 CNV gain 17666407
esv2760048 CNV gain+loss 17122850
dgv2638n100 CNV gain 25217958

Additional Variant Information for EFL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EFL1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for EFL1P1 Gene

Disorders for EFL1P1 Gene

Additional Disease Information for EFL1P1

No disorders were found for EFL1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EFL1P1 Gene

Publications for EFL1P1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for EFL1P1 Gene

Sources for EFL1P1 Gene

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