Aliases for EFCAB14-AS1 Gene

Subcategory (RNA class) for EFCAB14-AS1 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for EFCAB14-AS1 Gene

  • EFCAB14 Antisense RNA 1 2 3 5
  • KIAA0494 Antisense RNA 1 (Non-Protein Coding) 2
  • KIAA0494 Antisense RNA 1 2
  • HSALNG0003350 169
  • NONHSAG001351 94
  • KIAA0494-AS1 3
  • EFCAB14-AS1 2

External Ids for EFCAB14-AS1 Gene

Previous HGNC Symbols for EFCAB14-AS1 Gene

  • KIAA0494-AS1

Previous GeneCards Identifiers for EFCAB14-AS1 Gene

  • GC01P047141

Summaries for EFCAB14-AS1 Gene

GeneCards Summary for EFCAB14-AS1 Gene

EFCAB14-AS1 (EFCAB14 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for EFCAB14-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for EFCAB14-AS1 Gene

Genomics for EFCAB14-AS1 Gene

GeneHancer (GH) Regulatory Elements for EFCAB14-AS1 Gene

Promoters and enhancers for EFCAB14-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around EFCAB14-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for EFCAB14-AS1 Gene

Genomic Locations for EFCAB14-AS1 Gene
chr1:46,674,036-46,707,177
(GRCh38/hg38)
Size:
33,142 bases
Orientation:
Plus strand
chr1:47,139,708-47,157,770
(GRCh37/hg19)
Size:
18,063 bases
Orientation:
Plus strand

Genomic View for EFCAB14-AS1 Gene

Genes around EFCAB14-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EFCAB14-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EFCAB14-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EFCAB14-AS1 Gene

Proteins for EFCAB14-AS1 Gene

Post-translational modifications for EFCAB14-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for EFCAB14-AS1 Gene

Domains & Families for EFCAB14-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for EFCAB14-AS1 Gene

Function for EFCAB14-AS1 Gene

Phenotypes From GWAS Catalog for EFCAB14-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for EFCAB14-AS1 Gene

Localization for EFCAB14-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for EFCAB14-AS1 Gene

Pathways & Interactions for EFCAB14-AS1 Gene

PathCards logo

SuperPathways for EFCAB14-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for EFCAB14-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for EFCAB14-AS1 Gene

Drugs & Compounds for EFCAB14-AS1 Gene

No Compound Related Data Available

Transcripts for EFCAB14-AS1 Gene

mRNA/cDNA for EFCAB14-AS1 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(6) RNACentral transcripts :
(3) NONCODE transcripts :
(3) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for EFCAB14-AS1 Gene

No ASD Table

Relevant External Links for EFCAB14-AS1 Gene

GeneLoc Exon Structure for
EFCAB14-AS1
ECgene alternative splicing isoforms for
EFCAB14-AS1

Expression for EFCAB14-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EFCAB14-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for EFCAB14-AS1 Gene

This gene is overexpressed in Testis (x13.7).

SOURCE GeneReport for Unigene cluster for EFCAB14-AS1 Gene:

Hs.568643
genes like me logo Genes that share expression patterns with EFCAB14-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for EFCAB14-AS1 Gene

Orthologs for EFCAB14-AS1 Gene

Evolution for EFCAB14-AS1 Gene

ENSEMBL:
Gene Tree for EFCAB14-AS1 (if available)
TreeFam:
Gene Tree for EFCAB14-AS1 (if available)

No data available for Orthologs for EFCAB14-AS1 Gene

Paralogs for EFCAB14-AS1 Gene

No data available for Paralogs for EFCAB14-AS1 Gene

Variants for EFCAB14-AS1 Gene

Sequence variations from dbSNP and Humsavar for EFCAB14-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000167873 -- 46,673,425(+) T/G upstream_transcript_variant
rs1000267119 -- 46,676,706(+) G/C intron_variant
rs1000274259 -- 46,674,062(+) A/T non_coding_transcript_variant
rs1000425209 -- 46,683,841(+) A/G intron_variant
rs1000501931 -- 46,679,427(+) C/T intron_variant

Additional Variant Information for EFCAB14-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EFCAB14-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for EFCAB14-AS1 Gene

Disorders for EFCAB14-AS1 Gene

Additional Disease Information for EFCAB14-AS1

No disorders were found for EFCAB14-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EFCAB14-AS1 Gene

Publications for EFCAB14-AS1 Gene

  1. Serum ferritin levels are associated with a distinct phenotype of chronic hepatitis C poorly responding to pegylated interferon-alpha and ribavirin therapy. (PMID: 22095909) Lange CM … Swiss Hepatitis C Cohort Study Group (Hepatology (Baltimore, Md.) 2012) 3 56

Products for EFCAB14-AS1 Gene

Sources for EFCAB14-AS1 Gene