Aliases for DYNLRB2-AS1 Gene

Data sources for DYNLRB2-AS1 Gene:

Subcategory (RNA class) for DYNLRB2-AS1 Gene

lncRNA

Aliases for DYNLRB2-AS1 Gene

External Ids for DYNLRB2-AS1 Gene

Summaries for DYNLRB2-AS1 Gene

GeneCards Summary for DYNLRB2-AS1 Gene

DYNLRB2-AS1 (DYNLRB2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DYNLRB2-AS1 include Ayme-Gripp Syndrome and Cataract 21, Multiple Types.

Additional gene information for DYNLRB2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DYNLRB2-AS1 Gene

Genomics for DYNLRB2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DYNLRB2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J080564 Enhancer 0.6 Ensembl ENCODE 250.7 -1.3 -1266 1.6 GATA2 ZNF366 ZNF512 DYNLRB2-AS1 ENSG00000259867 piR-57133-237 DYNLRB2 LINC01227 CDYL2
GH16J080540 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +22.2 22212 1.8 ZSCAN16 ZBTB10 MXD4 MNT ETS1 MBD2 ZNF217 POLR2A ZEB1 ELF1 DYNLRB2 LOC105371360 DYNLRB2-AS1 ENSG00000259867 CDYL2
GH16J080526 Enhancer 0.9 Ensembl ENCODE 0.3 +36.0 36048 1.4 CTCF REST TRIM22 MAFF SMC3 RAD21 ZNF316 SPI1 NFE2 ZNF2 CDYL2 DYNLRB2 DYNLRB2-AS1 ENSG00000259867 tRX-Ala-NNN-4-1 MAF
GH16J080466 Enhancer 1 Ensembl ENCODE 0.2 +96.9 96934 1.6 CTCF REST ZNF740 TRIM22 RUNX1 SMAD4 RXRA MIER3 EBF1 SMC3 tRX-Ala-NNN-4-1 DYNLRB2 DYNLRB2-AS1 ENSG00000259867 MAF
GH16J080551 Enhancer 0.3 Ensembl 0.4 +11.7 11734 0.8 NFE2 ENSG00000260183 LOC105371360 DYNLRB2 DYNLRB2-AS1 ENSG00000259867 CDYL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DYNLRB2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DYNLRB2-AS1 Gene

Latest Assembly
chr16:80,155,958-80,563,135
(GRCh38/hg38)
Size:
407,178 bases
Orientation:
Minus strand

Previous Assembly
chr16:80,189,855-80,597,032
(GRCh37/hg19 by Entrez Gene)
Size:
407,178 bases
Orientation:
Minus strand

Genomic View for DYNLRB2-AS1 Gene

Genes around DYNLRB2-AS1 on UCSC Golden Path with GeneCards custom track
DYNLRB2-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
DYNLRB2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DYNLRB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DYNLRB2-AS1 Gene

Proteins for DYNLRB2-AS1 Gene

Post-translational modifications for DYNLRB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DYNLRB2-AS1 Gene

Domains & Families for DYNLRB2-AS1 Gene

Gene Families for DYNLRB2-AS1 Gene

genes like me logo Genes that share domains with DYNLRB2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DYNLRB2-AS1 Gene

Function for DYNLRB2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DYNLRB2-AS1 Gene

Localization for DYNLRB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DYNLRB2-AS1 Gene

Pathways & Interactions for DYNLRB2-AS1 Gene

PathCards logo

SuperPathways for DYNLRB2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DYNLRB2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DYNLRB2-AS1 Gene

Drugs & Compounds for DYNLRB2-AS1 Gene

No Compound Related Data Available

Transcripts for DYNLRB2-AS1 Gene

DYNLRB2-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

mRNA/cDNA for DYNLRB2-AS1 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for DYNLRB2-AS1 Gene

No ASD Table

Relevant External Links for DYNLRB2-AS1 Gene

GeneLoc Exon Structure for
DYNLRB2-AS1

Expression for DYNLRB2-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DYNLRB2-AS1 Gene

Orthologs for DYNLRB2-AS1 Gene

No data available for Orthologs and Evolution for DYNLRB2-AS1 Gene

Paralogs for DYNLRB2-AS1 Gene

No data available for Paralogs for DYNLRB2-AS1 Gene

Variants for DYNLRB2-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for DYNLRB2-AS1 Gene

SNP ID Clinical significance and condition Chr 16 pos Variation AA Info Type
rs11866734 Benign: not specified 80,549,600(-) C/T
NM_130897.3(DYNLRB2):c.196C>T (p.Leu66=)
NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for DYNLRB2-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for DYNLRB2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv3042n100 CNV loss 25217958
dgv5238n54 CNV loss 21841781
dgv540e214 CNV loss 21293372
dgv541e214 CNV loss 21293372
esv1056441 CNV insertion 17803354
esv1098067 CNV insertion 17803354
esv1208284 CNV deletion 17803354
esv1558918 CNV insertion 17803354
esv1602830 CNV deletion 17803354
esv2374489 CNV deletion 18987734
esv2457793 CNV deletion 19546169
esv25895 CNV loss 19812545
esv2656692 CNV deletion 23128226
esv2677570 CNV deletion 23128226
esv2714767 CNV deletion 23290073
esv2714768 CNV deletion 23290073
esv2714769 CNV deletion 23290073
esv2714770 CNV deletion 23290073
esv2714771 CNV deletion 23290073
esv2751614 CNV loss 17911159
esv2762333 CNV loss 21179565
esv3307074 CNV mobile element insertion 20981092
esv3351916 CNV duplication 20981092
esv3355885 CNV insertion 20981092
esv33683 CNV loss 17666407
esv3444093 CNV insertion 20981092
esv3553738 CNV deletion 23714750
esv3582375 CNV loss 25503493
esv3582376 CNV loss 25503493
esv3582377 CNV loss 25503493
esv3582378 CNV loss 25503493
esv3639261 CNV loss 21293372
esv3639262 CNV gain 21293372
esv3639264 CNV gain 21293372
esv3639266 CNV loss 21293372
esv3639267 CNV gain 21293372
esv3639269 CNV loss 21293372
esv3639270 CNV loss 21293372
esv3639273 CNV loss 21293372
esv3639274 CNV loss 21293372
esv5329 CNV loss 18987735
esv6166 CNV loss 19470904
nsv1055975 CNV gain 25217958
nsv1055982 CNV gain 25217958
nsv1059997 CNV loss 25217958
nsv1063466 CNV loss 25217958
nsv1071300 CNV deletion 25765185
nsv1113823 CNV deletion 24896259
nsv1123069 CNV deletion 24896259
nsv1123071 CNV deletion 24896259
nsv1134568 CNV deletion 24896259
nsv1138467 CNV deletion 24896259
nsv1896 CNV insertion 18451855
nsv457557 CNV loss 19166990
nsv457558 CNV loss 19166990
nsv457559 CNV loss 19166990
nsv471718 CNV loss 16327809
nsv471889 CNV novel sequence insertion 20440878
nsv507829 OTHER sequence alteration 20534489
nsv509634 CNV insertion 20534489
nsv510692 CNV deletion 20534489
nsv521087 CNV loss 19592680
nsv527134 CNV loss 19592680
nsv573295 CNV loss 21841781
nsv573296 CNV loss 21841781
nsv573297 CNV loss 21841781
nsv573300 CNV loss 21841781
nsv827772 CNV gain 20364138
nsv833298 CNV gain 17160897
nsv833299 CNV gain+loss 17160897
nsv833300 CNV gain 17160897
nsv958826 CNV deletion 24416366

Additional Variant Information for DYNLRB2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DYNLRB2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DYNLRB2-AS1 Gene

Disorders for DYNLRB2-AS1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for DYNLRB2-AS1 Gene - From: CVR

- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with DYNLRB2-AS1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for DYNLRB2-AS1 Gene

Publications for DYNLRB2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

No data available for Mastermind for DYNLRB2-AS1 Gene

Products for DYNLRB2-AS1 Gene

Sources for DYNLRB2-AS1 Gene