Aliases for DST-AS1 Gene

Subcategory (RNA class) for DST-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for DST-AS1 Gene

  • DST Antisense RNA 1 2 3 5
  • DST-AS1 2 5
  • NONHSAG043997.2 91
  • HSALNG0050796 164
  • Lnc-BEND6-1 165

External Ids for DST-AS1 Gene

Previous GeneCards Identifiers for DST-AS1 Gene

  • GC06P056848

Summaries for DST-AS1 Gene

GeneCards Summary for DST-AS1 Gene

DST-AS1 (DST Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DST-AS1 include Neuropathy, Hereditary Sensory And Autonomic, Type Vi.

Additional gene information for DST-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DST-AS1 Gene

Genomics for DST-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DST-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J056838 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 616.6 -2.0 -1980 7.5 RNF2 CTCF PRDM10 ZNF629 KDM1A ZNF692 BACH1 LARP7 ZNF143 ZIC2 DST-AS1 lnc-COL21A1-8 PRIM2 BEND6 piR-54764-557 DST COL21A1
GH06J056849 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 16.8 +7.6 7578 4.1 CTCF BACH1 FOXA1 STAT3 ZNF143 REST RAD21 IKZF2 POLR2A TRIM22 DST-AS1 RPL17P26 DST COL21A1
GH06J056859 Enhancer 1.2 Ensembl ENCODE dbSUPER 17.5 +21.2 21241 10.6 GATAD2A PRDM10 ZNF629 ZNF692 PRDM1 ZSCAN4 CTCF ZNF600 SOX6 CEBPA DST-AS1 BEND6 BAG2 ZNF451-AS1 RPL17P26 DST COL21A1
GH06J056763 Enhancer 1.3 Ensembl ENCODE dbSUPER 15 -73.6 -73577 14.6 GATAD2A CTCF TEAD4 PRDM10 BACH1 FOXA1 STAT3 JUND PRDM1 RELA ZNF451 PRIM2 KIAA1586 BEND6 DST-AS1 ZNF451-AS1 DST piR-33432-429 piR-49731-015 lnc-COL21A1-8
GH06J056802 Enhancer 1.2 Ensembl ENCODE dbSUPER 14.5 -37.2 -37178 9.8 CREB1 ATF7 PRDM10 ZNF629 ZNF692 JUND FOXA1 PRDM1 ZIC2 PATZ1 DST-AS1 piR-59412-010 piR-36393-449 lnc-COL21A1-8 DST COL21A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DST-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DST-AS1 Gene

Genomic Locations for DST-AS1 Gene
chr6:56,843,878-56,864,710
(GRCh38/hg38)
Size:
20,833 bases
Orientation:
Plus strand
chr6:56,708,800-56,728,876
(GRCh37/hg19)
Size:
20,077 bases
Orientation:
Plus strand

Genomic View for DST-AS1 Gene

Genes around DST-AS1 on UCSC Golden Path with GeneCards custom track
DST-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
DST-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DST-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DST-AS1 Gene

Proteins for DST-AS1 Gene

Post-translational modifications for DST-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DST-AS1 Gene

Domains & Families for DST-AS1 Gene

Gene Families for DST-AS1 Gene

genes like me logo Genes that share domains with DST-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DST-AS1 Gene

Function for DST-AS1 Gene

Phenotypes From GWAS Catalog for DST-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DST-AS1 Gene

Localization for DST-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DST-AS1 Gene

Pathways & Interactions for DST-AS1 Gene

PathCards logo

SuperPathways for DST-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DST-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DST-AS1 Gene

Drugs & Compounds for DST-AS1 Gene

No Compound Related Data Available

Transcripts for DST-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for DST-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000047E80B_9606 lncRNA 551 3

Ensembl: ENST00000426453 (view in UCSC) ,

LNCipedia: lnc-BEND6-1:1,

NONCODE: NONHSAT113248.2,

URS00007E4B2E_9606 lncRNA 827 2

HGNC: 40098,

RefSeq: NR_125866,

URS0000EEBDC9_9606 lncRNA 876 1

Ensembl: ENST00000662493 (view in UCSC) ,

URS00008B776D_9606 lncRNA 814 3

LncBook: HSALNT0107569,

LNCipedia: lnc-BEND6-1:2,

NONCODE: NONHSAT113249.2,

URS0000D5A162_9606 lncRNA 1141 2

LncBook: HSALNT0107563,

LNCipedia: lnc-BEND6-1:8,

DST-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for DST-AS1 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for DST-AS1 Gene

No ASD Table

Relevant External Links for DST-AS1 Gene

GeneLoc Exon Structure for
DST-AS1

Expression for DST-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DST-AS1 Gene

Orthologs for DST-AS1 Gene

Evolution for DST-AS1 Gene

ENSEMBL:
Gene Tree for DST-AS1 (if available)
TreeFam:
Gene Tree for DST-AS1 (if available)

No data available for Orthologs for DST-AS1 Gene

Paralogs for DST-AS1 Gene

No data available for Paralogs for DST-AS1 Gene

Variants for DST-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for DST-AS1 Gene

SNP ID Clinical significance and condition Chr 06 pos Variation AA Info Type
rs201871537 Likely Pathogenic: Neuropathy, hereditary sensory and autonomic, type VI 56,851,414(+) G/T MISSENSE_VARIANT

Additional dbSNP identifiers (rs#s) for DST-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for DST-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1073561 CNV deletion 25765185
nsv1122129 CNV deletion 24896259

Additional Variant Information for DST-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DST-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DST-AS1 Gene

Disorders for DST-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for DST-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
neuropathy, hereditary sensory and autonomic, type vi
  • hsan6
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for DST-AS1

genes like me logo Genes that share disorders with DST-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DST-AS1 Gene

Publications for DST-AS1 Gene

No publications were found for DST-AS1 Gene.

No data available for Mastermind for DST-AS1 Gene

Products for DST-AS1 Gene

Sources for DST-AS1 Gene