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Aliases for DSG2-AS1 Gene

Subcategory (RNA class) for DSG2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DSG2-AS1 Gene

  • DSG2 Antisense RNA 1 2 3 5

External Ids for DSG2-AS1 Gene

Summaries for DSG2-AS1 Gene

GeneCards Summary for DSG2-AS1 Gene

DSG2-AS1 (DSG2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DSG2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DSG2-AS1 Gene

Genomics for DSG2-AS1 Gene

GeneHancer (GH) Regulatory Elements for DSG2-AS1 Gene

Promoters and enhancers for DSG2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I031555 Enhancer 0.7 ENCODE 550.8 +0.8 838 0.2 CTCF PKNOX1 RB1 ZNF384 RAD21 YY1 ZNF335 ZNF366 ARID2 SMC3 DSG2-AS1 B4GALT6 TRAPPC8 ENSG00000266521 DSG2 GC18M031541
GH18I031509 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +44.8 44761 5 ATF1 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 ATF7 FOS SP5 ENSG00000266521 B4GALT6 DSG2 DSC3 DSG1 DSC2 DSG2-AS1
GH18I031497 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.2 +58.3 58304 2.8 HDGF ZNF2 ZNF48 YY1 GLIS2 ZNF207 KLF7 RUNX3 ZNF610 GMEB1 ENSG00000266521 DSG2 DSG2-AS1
GH18I031565 Enhancer 0.8 ENCODE 0.4 -9.7 -9689 1.8 ELF3 FOXA2 DMAP1 THRB RAD21 RARA CREM RXRA MXD4 REST TTR B4GALT6 SLC25A52 TRAPPC8 DSG2 DSG2-AS1 GC18M031541
GH18I031581 Enhancer 0.9 Ensembl ENCODE 0.3 -25.0 -24962 0.7 FOXA2 RXRA HLF MAX CEBPG REST RAD21 FOXA1 NR2F2 YY1 B4GALT6 SLC25A52 TTR DSG2-AS1 GC18M031541
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DSG2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DSG2-AS1 Gene

Genomic Locations for DSG2-AS1 Gene
chr18:31,542,146-31,556,911
(GRCh38/hg38)
Size:
14,766 bases
Orientation:
Minus strand
chr18:29,122,109-29,136,911
(GRCh37/hg19)

Genomic View for DSG2-AS1 Gene

Genes around DSG2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DSG2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DSG2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DSG2-AS1 Gene

Proteins for DSG2-AS1 Gene

Post-translational modifications for DSG2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DSG2-AS1 Gene

Domains & Families for DSG2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DSG2-AS1 Gene

Function for DSG2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DSG2-AS1 Gene

Localization for DSG2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DSG2-AS1 Gene

Pathways & Interactions for DSG2-AS1 Gene

SuperPathways for DSG2-AS1 Gene

No Data Available

Interacting Proteins for DSG2-AS1 Gene

Gene Ontology (GO) - Biological Process for DSG2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DSG2-AS1 Gene

Drugs & Compounds for DSG2-AS1 Gene

No Compound Related Data Available

Transcripts for DSG2-AS1 Gene

mRNA/cDNA for DSG2-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DSG2-AS1 Gene

No ASD Table

Relevant External Links for DSG2-AS1 Gene

GeneLoc Exon Structure for
DSG2-AS1
ECgene alternative splicing isoforms for
DSG2-AS1

Expression for DSG2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DSG2-AS1 Gene

genes like me logo Genes that share expression patterns with DSG2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DSG2-AS1 Gene

Orthologs for DSG2-AS1 Gene

Evolution for DSG2-AS1 Gene

ENSEMBL:
Gene Tree for DSG2-AS1 (if available)
TreeFam:
Gene Tree for DSG2-AS1 (if available)

No data available for Orthologs for DSG2-AS1 Gene

Paralogs for DSG2-AS1 Gene

No data available for Paralogs for DSG2-AS1 Gene

Variants for DSG2-AS1 Gene

Sequence variations from dbSNP and Humsavar for DSG2-AS1 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1042769 benign, likely-benign, not specified, Cardiovascular phenotype, Dilated Cardiomyopathy, Dominant, Cardiomyopathy, ARVC 31,545,891(-) A/G non_coding_transcript_variant
rs1047433 likely-benign, Dilated Cardiomyopathy, Dominant, Cardiomyopathy, ARVC 31,548,609(-) T/C intron_variant
rs1049204828 uncertain-significance, Dilated Cardiomyopathy, Dominant, Cardiomyopathy, ARVC 31,547,165(-) C/T intron_variant
rs10645928 likely-benign, Cardiomyopathy, ARVC, Dilated Cardiomyopathy, Dominant 31,548,456(-) TGT/TGTGT intron_variant
rs1064794709 likely-pathogenic, pathogenic, not provided, Dilated cardiomyopathy 1BB 31,546,340(-) TT/T intron_variant

Additional Variant Information for DSG2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DSG2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DSG2-AS1 Gene

Disorders for DSG2-AS1 Gene

Additional Disease Information for DSG2-AS1

No disorders were found for DSG2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DSG2-AS1 Gene

Publications for DSG2-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DSG2-AS1 Gene

Sources for DSG2-AS1 Gene

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