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Aliases for DSCR9 Gene

Subcategory (RNA class) for DSCR9 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for DSCR9 Gene

  • Down Syndrome Critical Region 9 (Non-Protein Coding) 2 3 5
  • Down Syndrome Critical Region Gene 9 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 38 2
  • NCRNA00038 3

External Ids for DSCR9 Gene

Previous GeneCards Identifiers for DSCR9 Gene

  • GC21P035170
  • GC21P037513
  • GC21P037502
  • GC21P038580
  • GC21P024056

Summaries for DSCR9 Gene

GeneCards Summary for DSCR9 Gene

DSCR9 (Down Syndrome Critical Region 9 (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with DSCR9 include Down Syndrome.

Additional gene information for DSCR9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DSCR9 Gene

Genomics for DSCR9 Gene

GeneHancer (GH) Regulatory Elements for DSCR9 Gene

Promoters and enhancers for DSCR9 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I037206 Enhancer 1.1 Ensembl ENCODE 550.8 -0.5 -486 3.1 HDGF PKNOX1 FOXA2 ARID4B IRF4 ZNF48 E2F8 ZNF207 ZNF143 FOS DSCR9 GC21P037206 TTC3 PIGP DSCR3
GH21I036697 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12 -507.4 -507380 6.9 HDGF SIN3A GLI4 ZNF2 GLIS2 SP3 SP5 YY2 ZNF662 REST SIM2 ENSG00000224269 SETD4 ENSG00000242553 RIMKLBP1 TTC3-AS1 TTC3 DSCR9 MORC3
GH21I037219 Promoter/Enhancer 1.5 Ensembl ENCODE 0.4 +12.4 12402 2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 IRF4 YY1 SLC30A9 POLR2B ENSG00000242553 TTC3 PIGP MORC3 RN7SL678P DSCR9 GC21P037206
GH21I037218 Enhancer 0.2 FANTOM5 0.4 +9.7 9659 0.1 ENSG00000242553 RN7SL678P DSCR9 GC21P037206
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DSCR9 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the DSCR9 gene promoter:

Genomic Locations for DSCR9 Gene

Genomic Locations for DSCR9 Gene
13,234 bases
Plus strand

Genomic View for DSCR9 Gene

Genes around DSCR9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DSCR9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DSCR9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DSCR9 Gene

Proteins for DSCR9 Gene

  • Protein details for DSCR9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Down syndrome critical region protein 9
    Protein Accession:
    Secondary Accessions:
    • B2R8P8

    Protein attributes for DSCR9 Gene

    149 amino acids
    Molecular mass:
    16743 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DSCR9 Gene

Post-translational modifications for DSCR9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DSCR9 Gene

Domains & Families for DSCR9 Gene

Protein Domains for DSCR9 Gene


Suggested Antigen Peptide Sequences for DSCR9 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DSCR9: view

No data available for Gene Families and UniProtKB/Swiss-Prot for DSCR9 Gene

Function for DSCR9 Gene

Phenotypes From GWAS Catalog for DSCR9 Gene

Gene Ontology (GO) - Molecular Function for DSCR9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with DSCR9: view

Phenotypes for DSCR9 Gene

genes like me logo Genes that share phenotypes with DSCR9: view

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DSCR9 Gene

Localization for DSCR9 Gene

Gene Ontology (GO) - Cellular Components for DSCR9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with DSCR9: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for DSCR9 Gene

Pathways & Interactions for DSCR9 Gene

SuperPathways for DSCR9 Gene

No Data Available

Interacting Proteins for DSCR9 Gene

Gene Ontology (GO) - Biological Process for DSCR9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with DSCR9: view

No data available for Pathways by source and SIGNOR curated interactions for DSCR9 Gene

Drugs & Compounds for DSCR9 Gene

No Compound Related Data Available

Transcripts for DSCR9 Gene

Unigene Clusters for DSCR9 Gene

Down syndrome critical region gene 9 (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DSCR9 Gene

No ASD Table

Relevant External Links for DSCR9 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for DSCR9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DSCR9 Gene

Protein differential expression in normal tissues from HIPED for DSCR9 Gene

This gene is overexpressed in Breast (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for DSCR9 Gene

Protein tissue co-expression partners for DSCR9 Gene

NURSA nuclear receptor signaling pathways regulating expression of DSCR9 Gene:


SOURCE GeneReport for Unigene cluster for DSCR9 Gene:


mRNA Expression by UniProt/SwissProt for DSCR9 Gene:

Tissue specificity: Testis specific.
genes like me logo Genes that share expression patterns with DSCR9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DSCR9 Gene

Orthologs for DSCR9 Gene

Evolution for DSCR9 Gene

Gene Tree for DSCR9 (if available)
Gene Tree for DSCR9 (if available)

No data available for Orthologs for DSCR9 Gene

Paralogs for DSCR9 Gene

No data available for Paralogs for DSCR9 Gene

Variants for DSCR9 Gene

Sequence variations from dbSNP and Humsavar for DSCR9 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000027978 -- 37,214,821(+) A/T intron_variant
rs1000186634 -- 37,208,870(+) C/T intron_variant
rs1000837081 -- 37,219,861(+) G/A intron_variant
rs1000896131 -- 37,214,959(+) C/T intron_variant
rs1001029722 -- 37,208,622(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for DSCR9 Gene

Variant ID Type Subtype PubMed ID
dgv70n68 CNV gain 17160897
nsv3512 CNV deletion 18451855

Additional Variant Information for DSCR9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DSCR9 Gene

Disorders for DSCR9 Gene

MalaCards: The human disease database

(1) MalaCards diseases for DSCR9 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
down syndrome
  • trisomy 21
- elite association - COSMIC cancer census association via MalaCards
Search DSCR9 in MalaCards View complete list of genes associated with diseases

Additional Disease Information for DSCR9

genes like me logo Genes that share disorders with DSCR9: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DSCR9 Gene

Publications for DSCR9 Gene

  1. Identification of two novel primate-specific genes in DSCR. (PMID: 12168953) Takamatsu K … Takeda T (DNA research : an international journal for rapid publication of reports on genes and genomes 2002) 2 3 4 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3 58
  4. Digital quantification of human eye color highlights genetic association of three new loci. (PMID: 20463881) Liu F … Kayser M (PLoS genetics 2010) 3 58
  5. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P … Vidal M (Genomics 2007) 3 58

Products for DSCR9 Gene

Sources for DSCR9 Gene

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