Aliases for DSCAS Gene
Subcategory (RNA class) for DSCAS Gene
non-coding RNA
Quality Score for this RNA gene is
13
External Ids for DSCAS Gene
- HGNC: 51116
- Entrez Gene: 101927698
- Ensembl: ENSG00000265888
Summaries for DSCAS Gene
GeneCards Summary for DSCAS Gene
DSCAS (DSC1/DSC2 Antisense RNA) is an RNA Gene, and is affiliated with the non-coding RNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DSCAS Gene
Genomics for DSCAS Gene
GeneHancer (GH) Regulatory Elements for DSCAS Gene
Promoters and enhancers for DSCAS Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J031097 | Promoter/Enhancer | 2.2 | EPDnew Ensembl ENCODE dbSUPER | 650.7 | -0.9 | -867 | 5.9 | HDGF PKNOX1 SMAD1 FOXA2 ARID4B SIN3A FEZF1 YY1 ZNF766 KLF13 | DSC2 DSCAS GC18P031094 | |
| GH18J031103 | Enhancer | 0.6 | ENCODE | 0.7 | +2.2 | 2205 | 0.2 | ZBTB21 MAFG ZNF398 TSHZ1 KLF4 ATF2 ZEB1 HIC1 PRDM6 ZNF316 | DSC2 DSCAS ENSG00000263698 | |
| GH18J031140 | Enhancer | 0.4 | FANTOM5 | 0.3 | +39.3 | 39310 | 0.2 | MGA | DSC2 ENSG00000263698 DSC1 DSCAS | |
| GH18J031156 | Enhancer | 0.6 | ENCODE | 0.2 | +55.9 | 55873 | 1.4 | SMARCE1 PKNOX1 REST DPF2 ZNF217 CTBP1 PRDM6 GATA3 WT1 TRIM28 | DSC1 DSC2 ENSG00000263698 DSCAS | |
| GH18J031162 | Promoter | 0.5 | EPDnew | 0.2 | +61.2 | 61152 | 0.1 | DSC1 ENSG00000263698 DSCAS |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around DSCAS on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for DSCAS Gene
Genomic Locations for DSCAS Gene
- chr18:31,101,588-31,162,789
- (GRCh38/hg38)
- Size:
- 61,202 bases
- Orientation:
- Plus strand
- chr18:28,681,551-28,742,752
- (GRCh37/hg19)
- Size:
- 61,202 bases
- Orientation:
- Plus strand
Genomic View for DSCAS Gene
Genes around DSCAS on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q12.1 by Entrez Gene
- 18q12.1 by HGNC
- 18q12.1 by Ensembl
DSCAS Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for DSCAS Gene
Proteins for DSCAS Gene
Post-translational modifications for DSCAS Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for DSCAS
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DSCAS
- Origene Custom Protein Services for DSCAS
- Search GeneTex for Proteins for DSCAS
No data available for DME Specific Peptides for DSCAS Gene
Domains & Families for DSCAS Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DSCAS Gene
Function for DSCAS Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for DSCAS
-
miRNA Products
Inhibitory RNA Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DSCAS Gene
Localization for DSCAS Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DSCAS Gene
Transcripts for DSCAS Gene
mRNA/cDNA for DSCAS Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000581836 553 bps (uc060ofl.1)
- (1) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for DSCAS
miRNA Products
Inhibitory RNA Products
Expression for DSCAS Gene
NURSA nuclear receptor signaling pathways regulating expression of DSCAS Gene:
DSCAS
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DSCAS Gene
Orthologs for DSCAS Gene
No data available for Orthologs for DSCAS Gene
Paralogs for DSCAS Gene
No data available for Paralogs for DSCAS Gene
Variants for DSCAS Gene
| SNP ID | Clin | Chr 18 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000567386 | uncertain-significance, Cardiomyopathy, ARVC | 31,102,337(+) | T/C | intron_variant | |
| rs188926948 | not-provided, uncertain-significance, not specified, Cardiomyopathy, ARVC | 31,102,379(+) | A/G | intron_variant | |
| rs555722283 | uncertain-significance, Cardiomyopathy, ARVC | 31,102,395(+) | C/A/T | intron_variant | |
| rs568391206 | uncertain-significance, Arrhythmogenic right ventricular cardiomyopathy, type 11, not specified | 31,101,938(+) | C/G/T | intron_variant | |
| rs762556795 | uncertain-significance, not specified, Arrhythmogenic right ventricular cardiomyopathy, type 11 | 31,101,968(+) | C/T | intron_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv57n6 | CNV | deletion | 16902084 |
| esv2646471 | CNV | insertion | 19546169 |
| esv2675538 | CNV | deletion | 23128226 |
| esv3305216 | CNV | mobile element insertion | 20981092 |
| esv3310011 | CNV | mobile element insertion | 20981092 |
| esv3404918 | CNV | insertion | 20981092 |
| esv3432249 | CNV | insertion | 20981092 |
| esv3642118 | CNV | loss | 21293372 |
| nsv1109142 | CNV | deletion | 24896259 |
| nsv130642 | CNV | deletion | 16902084 |
| nsv476063 | CNV | novel sequence insertion | 20440878 |
| nsv519734 | CNV | loss | 19592680 |
| nsv820166 | CNV | loss | 19587683 |
Additional Variant Information for DSCAS Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- DSCAS
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DSCAS Gene
Disorders for DSCAS Gene
Additional Disease Information for DSCAS
No disorders were found for DSCAS Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DSCAS Gene
Publications for DSCAS Gene
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
Products for DSCAS Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
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- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
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- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DSCAS
- Origene Custom Protein Services for DSCAS
- Browse OriGene Inhibitory RNA Products For DSCAS
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for DSCAS
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For DSCAS
- GenScript: Custom all cDNA clones Services for DSCAS
- GenScript Custom Purified and Recombinant Proteins Services for DSCAS
- GenScript Custom Assay Services for DSCAS
- GenScript Custom overexpressing Cell Line Services for DSCAS
- Browse GenScript CRISPR for DSCAS
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for DSCAS
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Search GeneTex for Antibodies for DSCAS
- Search GeneTex for Proteins for DSCAS
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for DSCAS
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for DSCAS
- Search GeneCopoeia for miRNA 3'UTR Target clone products for DSCAS
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for DSCAS
Sources for DSCAS Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt