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DSCAS (DSC1/DSC2 Antisense RNA) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DSCAS include Arrhythmogenic Right Ventricular Dysplasia, Familial, 11.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH18J031097 | Promoter/Enhancer | 2.2 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 250.7 | -0.6 | -633 | 5.9 | TBP MXD4 FEZF1 MNT IKZF1 SMAD5 HES1 MBD2 CTCF BHLHE40 | DSC2 DSCAS HSALNG0120717 ENSG00000263924 piR-38351-228 DSC3 | |
GH18J031103 | Enhancer | 0.7 | ENCODE | 0.7 | +2.4 | 2439 | 0.2 | ZEB1 JUND ZNF316 PRDM6 NFE2 ZNF24 ZNF362 MAFG ATF2 ZBTB21 | DSC2 HSALNG0120717 DSCAS ENSG00000263698 DSC1 | |
GH18J031104 | Enhancer | 0.4 | Ensembl | 0.7 | +3.3 | 3347 | 0.6 | SPI1 POLR2A KLF4 | DSC3 DSC2 DSCAS ENSG00000263698 DSC1 | |
GH18J031156 | Enhancer | 0.7 | Ensembl ENCODE | 0.2 | +56.1 | 56107 | 1.4 | ZNF217 REST CTBP1 PRDM6 SMARCE1 DPF2 PKNOX1 ZHX2 ZNF24 EP300 | DSC1 DSC2 HSALNG0120719 ENSG00000263698 DSCAS | |
GH18J031095 | Enhancer | 0.3 | Ensembl | 0.4 | -6.1 | -6053 | 0.2 | ZNF239 | piR-38351-228 DSC2 DSCAS HSALNG0120717 DSC3 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000051761A_9606 | lncRNA | 553 | 4 |
RefSeq: NR_110785, Ensembl: ENST00000581836 (view in UCSC) , LncBook: HSALNT0249566, NONCODE: NONHSAT058808.2, |
URS0000EECD1E_9606 | lncRNA | 953 | 1 |
Ensembl: ENST00000654403 (view in UCSC) , |
URS0000D5A2C0_9606 | lncRNA | 1022 | 2 |
LncBook: HSALNT0249564, LNCipedia: lnc-DSG1-14:1, |
URS0000E95981_9606 | lncRNA | 8121 | 1 |
LncBook: HSALNT0249561, |
URS0001BF5E93_9606 | lncRNA | 8120 | 1 |
LncBook: HSALNT0249561, |
SNP ID | Clinical significance and condition | Chr 18 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
889235 | Uncertain Significance: Arrhythmogenic right ventricular cardiomyopathy, type 11 | 31,102,380(+) |
G/A NM_024422.6(DSC2):c.-409C>T |
FIVE_PRIME_UTR | |
891405 | Uncertain Significance: Cardiomyopathy; Arrhythmogenic right ventricular cardiomyopathy, type 11 | 31,101,958(+) |
C/A NM_024422.6(DSC2):c.14G>T (p.Arg5Leu) |
MISSENSE | |
891646 | Uncertain Significance: Arrhythmogenic right ventricular cardiomyopathy, type 11 | 31,102,066(+) |
G/C NM_024422.6(DSC2):c.-95C>G |
FIVE_PRIME_UTR | |
891647 | Uncertain Significance: Arrhythmogenic right ventricular cardiomyopathy, type 11 | 31,102,158(+) |
G/A NM_024422.6(DSC2):c.-187C>T |
FIVE_PRIME_UTR | |
891648 | Uncertain Significance: Arrhythmogenic right ventricular cardiomyopathy, type 11 | 31,102,248(+) |
A/T NM_024422.6(DSC2):c.-277T>A |
FIVE_PRIME_UTR |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv57n6 | CNV | deletion | 16902084 |
esv2646471 | CNV | insertion | 19546169 |
esv2675538 | CNV | deletion | 23128226 |
esv3305216 | CNV | mobile element insertion | 20981092 |
esv3310011 | CNV | mobile element insertion | 20981092 |
esv3404918 | CNV | insertion | 20981092 |
esv3432249 | CNV | insertion | 20981092 |
esv3642118 | CNV | loss | 21293372 |
nsv1109142 | CNV | deletion | 24896259 |
nsv130642 | CNV | deletion | 16902084 |
nsv476063 | CNV | novel sequence insertion | 20440878 |
nsv519734 | CNV | loss | 19592680 |
nsv820166 | CNV | loss | 19587683 |
Disorder | Aliases | PubMed IDs |
---|---|---|
arrhythmogenic right ventricular dysplasia, familial, 11 |
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