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DSCAM-IT1 (DSCAM Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH21J040622 | Enhancer | 0.3 | Ensembl | 0.4 | +7.2 | 7167 | 2.4 | REST MAFK | ENSG00000207147 DSCAM-IT1 lnc-BACE2-5 DSCAM PCP4 | |
GH21J040618 | Enhancer | 0.3 | Ensembl | 0.4 | +12.3 | 12267 | 0.6 | POLR2A SMARCA4 | DSCAM-IT1 lnc-BACE2-5 DSCAM PCP4 | |
GH21J040603 | Enhancer | 0.2 | FANTOM5 | 0.3 | +27.2 | 27225 | 0.3 | DSCAM lnc-BACE2-5 DSCAM-IT1 PCP4 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000075E66D_9606 | lncRNA | 720 | 5 |
HGNC: 41327, RefSeq: NR_046774, Ensembl: ENST00000440363 (view in UCSC) , LNCipedia: DSCAM-IT1:2, NONCODE: NONHSAT082229.2, |
URS00007728EC_9606 | lncRNA | 464 | 3 |
Ensembl: ENST00000441910 (view in UCSC) , LNCipedia: DSCAM-IT1:1, NONCODE: NONHSAT082228.2, |
URS00009BA1D7_9606 | lncRNA | 826 | 1 |
NONCODE: NONHSAT191498.1, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv1557821 | CNV | insertion | 17803354 |
esv1934003 | CNV | deletion | 18987734 |
esv2723467 | CNV | deletion | 23290073 |
esv3647044 | CNV | loss | 21293372 |
nsv1121591 | CNV | deletion | 24896259 |
nsv1142331 | CNV | tandem duplication | 24896259 |
No disorders were found for DSCAM-IT1 Gene.