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Aliases for DPY19L2P3 Gene

Aliases for DPY19L2P3 Gene

  • DPY19L2 Pseudogene 3 2 3 5
  • Dpy-19-Like 2 Pseudogene 3 (C. Elegans) 2
  • Dpy-19-Like 2 Pseudogene 3 3

External Ids for DPY19L2P3 Gene

Previous GeneCards Identifiers for DPY19L2P3 Gene

  • GC07Ph29875
  • GC07Ph29876
  • GC07P029738
  • GC07P029689
  • GC07P029771
  • GC07P029724

Summaries for DPY19L2P3 Gene

GeneCards Summary for DPY19L2P3 Gene

DPY19L2P3 (DPY19L2 Pseudogene 3) is a Pseudogene.

Additional gene information for DPY19L2P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPY19L2P3 Gene

Genomics for DPY19L2P3 Gene

GeneHancer (GH) Regulatory Elements for DPY19L2P3 Gene

Promoters and enhancers for DPY19L2P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J029684 Promoter/Enhancer 1.4 Ensembl ENCODE 13.2 +34.9 34905 2.3 HDAC1 PKNOX1 RB1 SIN3A YY1 ZNF335 HCFC1 REST ZNF398 ELF1 ZNRF2P2 LOC646762 ENSG00000223813 DPY19L2P3 FKBP14 ENSG00000264520 PLEKHA8 PRR15 MIR550A3
GH07J029749 Enhancer 0.8 ENCODE 15.6 +99.9 99859 1 HDAC1 PKNOX1 NCOA2 TCF12 ZNF766 EGR1 ATF7 SMARCA5 NCOA1 REST DPY19L2P3 ENSG00000238906 ENSG00000223813 LOC101928208 WIPF3
GH07J029605 Enhancer 1.3 Ensembl ENCODE dbSUPER 6.2 -42.2 -42186 5.2 PKNOX1 ATF1 ZNF133 TCF12 GATA2 ZNF143 FOS DEK SMARCA4 HMBOX1 PRR15 ENSG00000223813 DPY19L2P3 ZNRF2P2 TMSB4XP3
GH07J029478 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 5 -170.1 -170088 2.4 SOX13 USF1 FOXA2 MAX RAD21 RARA YY1 POLR2A EGR1 GATAD2A CHN2 ENSG00000223813 PRR15 DPY19L2P3 GC07M029201 GC07P029212 ENSG00000285162
GH07J029805 Promoter/Enhancer 1.2 Ensembl ENCODE 6 +156.6 156630 2.5 BCOR CTCF MXI1 RB1 GTF2E2 SIN3A ZMYM3 ZIC2 ZNF335 CCNT2 WIPF3 DPY19L2P3 MTURN GC07P029912
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DPY19L2P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DPY19L2P3 Gene

Genomic Locations for DPY19L2P3 Gene
chr7:29,650,227-29,742,594
(GRCh38/hg38)
Size:
92,368 bases
Orientation:
Plus strand
chr7:29,689,843-29,782,210
(GRCh37/hg19)

Genomic View for DPY19L2P3 Gene

Genes around DPY19L2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPY19L2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPY19L2P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPY19L2P3 Gene

Proteins for DPY19L2P3 Gene

Post-translational modifications for DPY19L2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPY19L2P3 Gene

Domains & Families for DPY19L2P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DPY19L2P3 Gene

Function for DPY19L2P3 Gene

Phenotypes From GWAS Catalog for DPY19L2P3 Gene

Phenotypes for DPY19L2P3 Gene

genes like me logo Genes that share phenotypes with DPY19L2P3: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPY19L2P3 Gene

Localization for DPY19L2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPY19L2P3 Gene

Pathways & Interactions for DPY19L2P3 Gene

SuperPathways for DPY19L2P3 Gene

No Data Available

Interacting Proteins for DPY19L2P3 Gene

Gene Ontology (GO) - Biological Process for DPY19L2P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DPY19L2P3 Gene

Drugs & Compounds for DPY19L2P3 Gene

No Compound Related Data Available

Transcripts for DPY19L2P3 Gene

mRNA/cDNA for DPY19L2P3 Gene

(4) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DPY19L2P3 Gene

Dpy-19-like 2 pseudogene 3 (C. elegans):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DPY19L2P3 Gene

No ASD Table

Relevant External Links for DPY19L2P3 Gene

GeneLoc Exon Structure for
DPY19L2P3
ECgene alternative splicing isoforms for
DPY19L2P3

Expression for DPY19L2P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DPY19L2P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of DPY19L2P3 Gene:

DPY19L2P3

SOURCE GeneReport for Unigene cluster for DPY19L2P3 Gene:

Hs.652669
genes like me logo Genes that share expression patterns with DPY19L2P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPY19L2P3 Gene

Orthologs for DPY19L2P3 Gene

Evolution for DPY19L2P3 Gene

ENSEMBL:
Gene Tree for DPY19L2P3 (if available)
TreeFam:
Gene Tree for DPY19L2P3 (if available)

No data available for Orthologs for DPY19L2P3 Gene

Paralogs for DPY19L2P3 Gene

No data available for Paralogs for DPY19L2P3 Gene

Variants for DPY19L2P3 Gene

Sequence variations from dbSNP and Humsavar for DPY19L2P3 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000561299 -- 29,685,045(+) G/A/C upstream_transcript_variant
rs1001183054 -- 29,685,186(+) C/T non_coding_transcript_variant
rs1002059331 -- 29,684,818(+) C/A upstream_transcript_variant
rs1002408695 -- 29,684,603(+) T/G upstream_transcript_variant
rs1002573292 -- 29,687,098(+) T/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for DPY19L2P3 Gene

Variant ID Type Subtype PubMed ID
dgv11249n54 CNV gain 21841781
dgv235n111 CNV duplication 26073780
dgv6313n100 CNV gain 25217958
dgv6314n100 CNV gain 25217958
dgv6315n100 CNV loss 25217958
esv24568 CNV gain+loss 19812545
esv2734186 CNV deletion 23290073
esv2759521 CNV gain 17122850
esv3576300 CNV gain 25503493
esv3612697 CNV loss 21293372
esv3612698 CNV gain 21293372
nsv1068321 OTHER inversion 25765185
nsv1144168 CNV deletion 24896259
nsv1148830 OTHER inversion 26484159
nsv469585 CNV gain 16826518
nsv516270 CNV gain+loss 19592680
nsv606486 CNV loss 21841781
nsv8072 CNV gain+loss 18304495
nsv824045 CNV gain 20364138
nsv830935 CNV gain 17160897
nsv966769 CNV duplication 23825009

Additional Variant Information for DPY19L2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPY19L2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DPY19L2P3 Gene

Disorders for DPY19L2P3 Gene

Additional Disease Information for DPY19L2P3

No disorders were found for DPY19L2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DPY19L2P3 Gene

Publications for DPY19L2P3 Gene

  1. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 44 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DPY19L2P3 Gene

Sources for DPY19L2P3 Gene

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