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Aliases for DPPA5P4 Gene

Subcategory (RNA class) for DPPA5P4 Gene

lncRNA

Aliases for DPPA5P4 Gene

  • Developmental Pluripotency Associated 5 Pseudogene 4 2 3 5

External Ids for DPPA5P4 Gene

ORGUL Members for DPPA5P4 Gene

Previous GeneCards Identifiers for DPPA5P4 Gene

  • GC14M075760

Summaries for DPPA5P4 Gene

GeneCards Summary for DPPA5P4 Gene

DPPA5P4 (Developmental Pluripotency Associated 5 Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for DPPA5P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPPA5P4 Gene

Genomics for DPPA5P4 Gene

GeneHancer (GH) Regulatory Elements for DPPA5P4 Gene

Promoters and enhancers for DPPA5P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J075293 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 7.5 -3.9 -3942 6.9 HDGF PKNOX1 CLOCK FOXA2 ARID4B NEUROD1 SIN3A FEZF1 YBX1 ZNF2 JDP2 TMED10 NEK9 LINC01220 BATF FOS DPPA5P4 SYNDIG1L FLVCR2
GH14J075242 Enhancer 0.9 Ensembl ENCODE dbSUPER 12 +49.6 49602 1.4 OSR2 BCOR ADNP ZNF341 ZMYM3 KDM1A DPPA5P4 ABCD4 LOC105370571 ENSG00000258740 RNU4ATAC14P
GH14J075141 Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +151.1 151106 0.7 TMED10 DPPA5P4 JDP2 ZC2HC1C MLH3 FOS NEK9 GC14P075088
GH14J075142 Enhancer 0.7 Ensembl dbSUPER 11.6 +150.0 149994 0.2 OSR2 CTCF ZFHX2 PKNOX1 PRDM6 EIF2B2 TMED10 DPPA5P4 JDP2 NEK9 GC14P075088
GH14J075145 Enhancer 0.7 ENCODE dbSUPER 11.6 +150.3 150302 0.2 CTCF NFIL3 ZNF654 MAX RAD21 TMED10 DPPA5P4 JDP2 NEK9 GC14P075088
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DPPA5P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DPPA5P4 Gene

Genomic Locations for DPPA5P4 Gene
chr14:75,292,008-75,292,495
(GRCh38/hg38)
Size:
488 bases
Orientation:
Minus strand
chr14:75,758,711-75,761,016
(GRCh37/hg19)
Size:
2,306 bases
Orientation:
Minus strand

Genomic View for DPPA5P4 Gene

Genes around DPPA5P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPPA5P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPPA5P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPPA5P4 Gene

Function for DPPA5P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPPA5P4 Gene

Localization for DPPA5P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPPA5P4 Gene

Pathways & Interactions for DPPA5P4 Gene

SuperPathways for DPPA5P4 Gene

No Data Available

Interacting Proteins for DPPA5P4 Gene

Gene Ontology (GO) - Biological Process for DPPA5P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DPPA5P4 Gene

Drugs & Compounds for DPPA5P4 Gene

No Compound Related Data Available

Transcripts for DPPA5P4 Gene

mRNA/cDNA for DPPA5P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DPPA5P4 Gene

No ASD Table

Relevant External Links for DPPA5P4 Gene

GeneLoc Exon Structure for
DPPA5P4
ECgene alternative splicing isoforms for
DPPA5P4

Expression for DPPA5P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DPPA5P4 Gene

mRNA differential expression in normal tissues according to GTEx for DPPA5P4 Gene

This gene is overexpressed in Testis (x30.5), Whole Blood (x7.0), and Cervix - Endocervix (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of DPPA5P4 Gene:

DPPA5P4
genes like me logo Genes that share expression patterns with DPPA5P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPPA5P4 Gene

Orthologs for DPPA5P4 Gene

Evolution for DPPA5P4 Gene

ENSEMBL:
Gene Tree for DPPA5P4 (if available)
TreeFam:
Gene Tree for DPPA5P4 (if available)

No data available for Orthologs for DPPA5P4 Gene

Paralogs for DPPA5P4 Gene

No data available for Paralogs for DPPA5P4 Gene

Variants for DPPA5P4 Gene

Additional Variant Information for DPPA5P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPPA5P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DPPA5P4 Gene

Disorders for DPPA5P4 Gene

No disorders were found for DPPA5P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DPPA5P4 Gene

Publications for DPPA5P4 Gene

No publications were found for DPPA5P4 Gene.

Products for DPPA5P4 Gene

Sources for DPPA5P4 Gene

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