Aliases for DPPA5P1 Gene

Aliases for DPPA5P1 Gene

  • Developmental Pluripotency Associated 5 Pseudogene 1 2 3 5
  • DPPA5P1 5

External Ids for DPPA5P1 Gene

Previous GeneCards Identifiers for DPPA5P1 Gene

  • GC19M052931

Summaries for DPPA5P1 Gene

GeneCards Summary for DPPA5P1 Gene

DPPA5P1 (Developmental Pluripotency Associated 5 Pseudogene 1) is a Pseudogene.

Additional gene information for DPPA5P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DPPA5P1 Gene

Genomics for DPPA5P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DPPA5P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J052429 Promoter 0.7 EPDnew 0.7 -2.9 -2879 0.1 ELF1 ZNF316 NFE2 NRF1 ZBTB33 GABPB1 ZSCAN29 ZNF534 piR-50444-235 DPPA5P1 ZNF528
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DPPA5P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DPPA5P1 Gene

Latest Assembly
chr19:52,425,745-52,426,250
(GRCh38/hg38)
Size:
506 bases
Orientation:
Minus strand

Previous Assembly
chr19:52,928,998-52,929,503
(GRCh37/hg19 by Entrez Gene)
Size:
506 bases
Orientation:
Minus strand

chr19:52,929,116-52,929,455
(GRCh37/hg19 by Ensembl)
Size:
340 bases
Orientation:
Minus strand

Genomic View for DPPA5P1 Gene

Genes around DPPA5P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPPA5P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPPA5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPPA5P1 Gene

Proteins for DPPA5P1 Gene

Post-translational modifications for DPPA5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPPA5P1 Gene

Domains & Families for DPPA5P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DPPA5P1 Gene

Function for DPPA5P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPPA5P1 Gene

Localization for DPPA5P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPPA5P1 Gene

Pathways & Interactions for DPPA5P1 Gene

PathCards logo

SuperPathways for DPPA5P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DPPA5P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DPPA5P1 Gene

Drugs & Compounds for DPPA5P1 Gene

No Compound Related Data Available

Transcripts for DPPA5P1 Gene

mRNA/cDNA for DPPA5P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DPPA5P1 Gene

No ASD Table

Relevant External Links for DPPA5P1 Gene

GeneLoc Exon Structure for
DPPA5P1

Expression for DPPA5P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DPPA5P1 Gene

genes like me logo Genes that share expression patterns with DPPA5P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPPA5P1 Gene

Orthologs for DPPA5P1 Gene

Evolution for DPPA5P1 Gene

ENSEMBL:
Gene Tree for DPPA5P1 (if available)
TreeFam:
Gene Tree for DPPA5P1 (if available)

No data available for Orthologs for DPPA5P1 Gene

Paralogs for DPPA5P1 Gene

No data available for Paralogs for DPPA5P1 Gene

Variants for DPPA5P1 Gene

Additional Variant Information for DPPA5P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPPA5P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DPPA5P1 Gene

Disorders for DPPA5P1 Gene

No disorders were found for DPPA5P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DPPA5P1 Gene

Publications for DPPA5P1 Gene

  1. Atypical structure and phylogenomic evolution of the new eutherian oocyte- and embryo-expressed KHDC1/DPPA5/ECAT1/OOEP gene family. (PMID: 17913455) Pierre A … Monget P (Genomics 2007) 2 3

No data available for Mastermind for DPPA5P1 Gene

Products for DPPA5P1 Gene

Sources for DPPA5P1 Gene