Aliases for DPPA2P4 Gene

Aliases for DPPA2P4 Gene

  • Developmental Pluripotency Associated 2 Pseudogene 4 2 3 5

External Ids for DPPA2P4 Gene

Previous GeneCards Identifiers for DPPA2P4 Gene

  • GC16P056721
  • GC16P056725

Summaries for DPPA2P4 Gene

GeneCards Summary for DPPA2P4 Gene

DPPA2P4 (Developmental Pluripotency Associated 2 Pseudogene 4) is a Pseudogene.

Additional gene information for DPPA2P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DPPA2P4 Gene

Genomics for DPPA2P4 Gene

GeneHancer (GH) Regulatory Elements for DPPA2P4 Gene

Promoters and enhancers for DPPA2P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J056688 Enhancer 0.3 Ensembl 500.7 +1.9 1864 0.2 ZNF24 EBF1 DPPA2P4 lnc-MT1X-2
GH16J056681 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 -3.4 -3387 5.2 NRF1 POLR2G NCOR1 GTF2E2 PHF8 ZNF10 ZIC2 POLR2A TCF7 ZBTB26 MT1X ENSG00000259827 CES1P2 DPPA2P4
GH16J056701 Enhancer 1.1 Ensembl ENCODE 0.4 +15.3 15264 1 CTCF SP1 REST ZBTB25 RAD21 MYC TRIM22 TEAD1 ZBTB26 ZKSCAN8 lnc-MT1X-2 MT1X DPPA2P4 LOC105371286
GH16J056691 Enhancer 0.9 Ensembl ENCODE 0.4 +5.4 5387 2 ZNF217 KLF4 CTBP1 DEK USF1 FOS NR3C1 RCOR1 ELF1 ZFHX2 MT1X DPPA2P4 lnc-MT1X-2
GH16J056690 Enhancer 0.6 Ensembl ENCODE 0.7 +2.7 2664 1 SAP130 TFAP4 EBF1 FOXA1 MT1X DPPA2P4 lnc-MT1X-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DPPA2P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DPPA2P4 Gene

Genomic Locations for DPPA2P4 Gene
chr16:56,686,837-56,688,298
(GRCh38/hg38)
Size:
1,462 bases
Orientation:
Plus strand
chr16:56,720,754-56,722,210
(GRCh37/hg19)
Size:
1,457 bases
Orientation:
Plus strand

Genomic View for DPPA2P4 Gene

Genes around DPPA2P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPPA2P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPPA2P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPPA2P4 Gene

Proteins for DPPA2P4 Gene

Post-translational modifications for DPPA2P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPPA2P4 Gene

Domains & Families for DPPA2P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DPPA2P4 Gene

Function for DPPA2P4 Gene

Phenotypes From GWAS Catalog for DPPA2P4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPPA2P4 Gene

Localization for DPPA2P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPPA2P4 Gene

Pathways & Interactions for DPPA2P4 Gene

PathCards logo

SuperPathways for DPPA2P4 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for DPPA2P4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DPPA2P4 Gene

Drugs & Compounds for DPPA2P4 Gene

No Compound Related Data Available

Transcripts for DPPA2P4 Gene

mRNA/cDNA for DPPA2P4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DPPA2P4 Gene

No ASD Table

Relevant External Links for DPPA2P4 Gene

GeneLoc Exon Structure for
DPPA2P4

Expression for DPPA2P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DPPA2P4 Gene

genes like me logo Genes that share expression patterns with DPPA2P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPPA2P4 Gene

Orthologs for DPPA2P4 Gene

Evolution for DPPA2P4 Gene

ENSEMBL:
Gene Tree for DPPA2P4 (if available)
TreeFam:
Gene Tree for DPPA2P4 (if available)

No data available for Orthologs for DPPA2P4 Gene

Paralogs for DPPA2P4 Gene

No data available for Paralogs for DPPA2P4 Gene

Variants for DPPA2P4 Gene

Additional Variant Information for DPPA2P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPPA2P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DPPA2P4 Gene

Disorders for DPPA2P4 Gene

No disorders were found for DPPA2P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DPPA2P4 Gene

Publications for DPPA2P4 Gene

No publications were found for DPPA2P4 Gene.

No data available for Mastermind for DPPA2P4 Gene

Products for DPPA2P4 Gene

Sources for DPPA2P4 Gene