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Aliases for DPP9-AS1 Gene

Subcategory (RNA class) for DPP9-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for DPP9-AS1 Gene

  • DPP9 Antisense RNA 1 2 3 5
  • Uncharacterized Protein LOC100131094 3

External Ids for DPP9-AS1 Gene

Summaries for DPP9-AS1 Gene

GeneCards Summary for DPP9-AS1 Gene

DPP9-AS1 (DPP9 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DPP9-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPP9-AS1 Gene

Genomics for DPP9-AS1 Gene

GeneHancer (GH) Regulatory Elements for DPP9-AS1 Gene

Promoters and enhancers for DPP9-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J004678 Enhancer 0.6 ENCODE 550.7 -0.2 -152 1.1 ZBTB33 PATZ1 KLF9 SP2 HDAC1 NRF1 HDGF MNT SP3 BHLHE40 DPP9-AS1 GC19P004682 GC19M004658 MYDGF DPP9
GH19J003760 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 44.5 -917.0 -917039 3 SUZ12 ZBTB33 FOXA1 SP1 MNT ZFX HCFC1 MLLT1 ZNF687 GTF3C2 APBA3 MRPL54 LOC105372248 GC19M003753 CACTIN-AS1 DPP9-AS1 ENSG00000267030 YJU2 ENSG00000267139 CACTIN
GH19J004721 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 23 +44.8 44821 4.5 POLR3G ZBTB33 DACH1 FOXA1 ZNF473 NR2F6 SP1 MNT POLR3A ZFX DPP9 LOC105372250 GC19M004737 GC19P004753 TRV-CAC3-1 TRG-TCC1-1 SAFB PTPRS SAFB2 SNRPEP4
GH19J004790 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 23.4 +112.6 112571 2.5 SUZ12 LCORL SPI1 RAD21 NR2F6 SP1 MNT POLR3A ZKSCAN8 ZFX ENSG00000268536 FEM1A GC19P004792 DUS3L DPP9-AS1 HSD11B1L ENSG00000267030 YJU2 SAFB2 SNRPEP4
GH19J004574 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 22.8 -103.8 -103799 2.5 DACH1 GTF2F1 MLLT1 GTF3C2 L3MBTL2 TEAD4 PRDM1 CDC5L ZSCAN21 SMARCA4 CACTIN YJU2 CACTIN-AS1 TICAM1 APBA3 DPP9-AS1 ENSG00000269807 ENSG00000267030 ENSG00000267769 SH3GL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DPP9-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DPP9-AS1 Gene

Genomic Locations for DPP9-AS1 Gene
chr19:4,679,282-4,685,948
(GRCh38/hg38)
Size:
6,667 bases
Orientation:
Plus strand
chr19:4,679,294-4,685,960
(GRCh37/hg19)
Size:
6,667 bases
Orientation:
Plus strand

Genomic View for DPP9-AS1 Gene

Genes around DPP9-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPP9-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPP9-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPP9-AS1 Gene

Proteins for DPP9-AS1 Gene

Post-translational modifications for DPP9-AS1 Gene

No Post-translational modifications

Other Protein References for DPP9-AS1 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for DPP9-AS1 Gene

Domains & Families for DPP9-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DPP9-AS1 Gene

Function for DPP9-AS1 Gene

Phenotypes From GWAS Catalog for DPP9-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPP9-AS1 Gene

Localization for DPP9-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPP9-AS1 Gene

Pathways & Interactions for DPP9-AS1 Gene

SuperPathways for DPP9-AS1 Gene

No Data Available

Interacting Proteins for DPP9-AS1 Gene

Gene Ontology (GO) - Biological Process for DPP9-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DPP9-AS1 Gene

Drugs & Compounds for DPP9-AS1 Gene

No Compound Related Data Available

Transcripts for DPP9-AS1 Gene

mRNA/cDNA for DPP9-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for DPP9-AS1 Gene

No ASD Table

Relevant External Links for DPP9-AS1 Gene

GeneLoc Exon Structure for
DPP9-AS1
ECgene alternative splicing isoforms for
DPP9-AS1

Expression for DPP9-AS1 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPP9-AS1 Gene

Orthologs for DPP9-AS1 Gene

Evolution for DPP9-AS1 Gene

ENSEMBL:
Gene Tree for DPP9-AS1 (if available)
TreeFam:
Gene Tree for DPP9-AS1 (if available)

No data available for Orthologs for DPP9-AS1 Gene

Paralogs for DPP9-AS1 Gene

No data available for Paralogs for DPP9-AS1 Gene

Variants for DPP9-AS1 Gene

Sequence variations from dbSNP and Humsavar for DPP9-AS1 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1001303597 -- 4,684,395(+) G/A 3_prime_UTR_variant
rs1001442408 -- 4,679,109(+) G/A upstream_transcript_variant
rs1001461923 -- 4,681,599(+) C/G intron_variant
rs1001561345 -- 4,680,360(+) A/G intron_variant
rs1001811729 -- 4,678,870(+) G/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DPP9-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1062709 CNV loss 25217958
nsv428361 CNV loss 18775914
nsv578452 CNV loss 21841781
nsv833721 CNV loss 17160897
nsv953950 CNV deletion 24416366

Additional Variant Information for DPP9-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPP9-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DPP9-AS1 Gene

Disorders for DPP9-AS1 Gene

Additional Disease Information for DPP9-AS1

No disorders were found for DPP9-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DPP9-AS1 Gene

Publications for DPP9-AS1 Gene

No publications were found for DPP9-AS1 Gene.

Products for DPP9-AS1 Gene

Sources for DPP9-AS1 Gene

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