Aliases for DPP3-DT Gene

Data sources for DPP3-DT Gene:

RNA type for DPP3-DT Gene

lncRNA

Aliases for DPP3-DT Gene

External Ids for DPP3-DT Gene

Summaries for DPP3-DT Gene

GeneCards Summary for DPP3-DT Gene

DPP3-DT (DPP3 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DPP3-DT Gene

Genomics for DPP3-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DPP3-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DPP3-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DPP3-DT Gene

Latest Assembly
chr11:66,469,652-66,480,317
(GRCh38/hg38)
Size:
10,666 bases
Orientation:
Minus strand

Previous Assembly
chr11:66,240,961-66,247,720
(GRCh37/hg19 by Entrez Gene)
Size:
6,760 bases
Orientation:
Minus strand

chr11:66,240,961-66,247,704
(GRCh37/hg19 by Ensembl)
Size:
6,744 bases
Orientation:
Minus strand

Genomic View for DPP3-DT Gene

Genes around DPP3-DT on UCSC Golden Path with GeneCards custom track
DPP3-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
DPP3-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPP3-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPP3-DT Gene

Proteins for DPP3-DT Gene

Post-translational modifications for DPP3-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPP3-DT Gene

Domains & Families for DPP3-DT Gene

Gene Families for DPP3-DT Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
genes like me logo Genes that share domains with DPP3-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DPP3-DT Gene

Function for DPP3-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPP3-DT Gene

Localization for DPP3-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPP3-DT Gene

Pathways & Interactions for DPP3-DT Gene

PathCards logo

SuperPathways for DPP3-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for DPP3-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DPP3-DT Gene

Drugs & Compounds for DPP3-DT Gene

No Compound Related Data Available

Transcripts for DPP3-DT Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for DPP3-DT Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00003A76F8_9606 lncRNA 477 4

Ensembl: ENST00000602951 (view in UCSC) ,

LncBook: HSALNT0177055,

LNCipedia: lnc-MRPL11-1:7,

NONCODE: NONHSAT022304.2,

URS00000E26DE_9606 lncRNA 946 3

Ensembl: ENST00000527274 (view in UCSC) ,

LNCipedia: lnc-MRPL11-1:6,

NONCODE: NONHSAT022308.2,

URS000006C019_9606 lncRNA 828 3

Ensembl: ENST00000527092 (view in UCSC) ,

LNCipedia: lnc-MRPL11-1:2,

NONCODE: NONHSAT022303.2,

URS000059583F_9606 lncRNA 584 3

Ensembl: ENST00000533502 (view in UCSC) ,

LNCipedia: lnc-MRPL11-1:4,

NONCODE: NONHSAT022306.2,

URS000016CA8C_9606 lncRNA 569 3

Ensembl: ENST00000525142 (view in UCSC) ,

LNCipedia: lnc-MRPL11-1:1,

NONCODE: NONHSAT022309.2,

DPP3-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for DPP3-DT Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for DPP3-DT Gene

No ASD Table

Relevant External Links for DPP3-DT Gene

GeneLoc Exon Structure for
DPP3-DT

Expression for DPP3-DT Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DPP3-DT

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPP3-DT Gene

Orthologs for DPP3-DT Gene

Evolution for DPP3-DT Gene

ENSEMBL:
Gene Tree for DPP3-DT (if available)
TreeFam:
Gene Tree for DPP3-DT (if available)
Alliance of Genome Resources:
Additional Orthologs for DPP3-DT

No data available for Orthologs for DPP3-DT Gene

Paralogs for DPP3-DT Gene

No data available for Paralogs for DPP3-DT Gene

Variants for DPP3-DT Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for DPP3-DT Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for DPP3-DT Gene

Variant ID Type Subtype PubMed ID
nsv468601 CNV loss 19166990
nsv522277 CNV loss 19592680
nsv555224 CNV loss 21841781
nsv832193 CNV loss 17160897

Additional Variant Information for DPP3-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPP3-DT
Leiden Open Variation Database (LOVD)
DPP3-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for DPP3-DT Gene

Disorders for DPP3-DT Gene

Additional Disease Information for DPP3-DT

Open Targets Platform
Open Targets Platform

No disorders were found for DPP3-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DPP3-DT Gene

Publications for DPP3-DT Gene

No publications were found for DPP3-DT Gene.

No data available for Mastermind for DPP3-DT Gene

Products for DPP3-DT Gene

Sources for DPP3-DT Gene