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Aliases for DPP10-AS1 Gene

Subcategory (RNA class) for DPP10-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for DPP10-AS1 Gene

  • DPP10 Antisense RNA 1 2 3 5

External Ids for DPP10-AS1 Gene

Previous GeneCards Identifiers for DPP10-AS1 Gene

  • GC02M115891

Summaries for DPP10-AS1 Gene

GeneCards Summary for DPP10-AS1 Gene

DPP10-AS1 (DPP10 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with DPP10-AS1 include Breast Cancer and Colorectal Cancer.

Additional gene information for DPP10-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPP10-AS1 Gene

Genomics for DPP10-AS1 Gene

GeneHancer (GH) Regulatory Elements for DPP10-AS1 Gene

Promoters and enhancers for DPP10-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J115160 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 657.6 -0.2 -231 2.3 SP1 USF1 SUZ12 MAX EZH2 DPP10-AS1 DPP10 GC02P115207
GH02J114709 Enhancer 0.6 ENCODE dbSUPER 5.4 +451.1 451074 2.3 NANOG POU5F1 SLC35F5 DPP10-AS1 DPP10-AS3 GC02P114561 DPP10
GH02J114714 Enhancer 0.2 dbSUPER 4.7 +446.5 446475 1.1 DPP10-AS1 DPP10-AS3 GC02P114561 DPP10
GH02J115139 Enhancer 0.3 FANTOM5 0.3 +21.5 21488 0.3 GC02P115139 DPP10 DPP10-AS1
GH02J115171 Enhancer 0.2 FANTOM5 0.4 -10.6 -10565 0.4 DPP10 DPP10-AS1 GC02P115207
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DPP10-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DPP10-AS1 Gene

Genomic Locations for DPP10-AS1 Gene
chr2:115,130,935-115,161,343
(GRCh38/hg38)
Size:
30,409 bases
Orientation:
Minus strand
chr2:115,888,512-115,918,920
(GRCh37/hg19)
Size:
30,409 bases
Orientation:
Minus strand

Genomic View for DPP10-AS1 Gene

Genes around DPP10-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DPP10-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DPP10-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPP10-AS1 Gene

Proteins for DPP10-AS1 Gene

Post-translational modifications for DPP10-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPP10-AS1 Gene

Domains & Families for DPP10-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DPP10-AS1 Gene

Function for DPP10-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DPP10-AS1 Gene

Localization for DPP10-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DPP10-AS1 Gene

Pathways & Interactions for DPP10-AS1 Gene

SuperPathways for DPP10-AS1 Gene

No Data Available

Interacting Proteins for DPP10-AS1 Gene

Gene Ontology (GO) - Biological Process for DPP10-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DPP10-AS1 Gene

Drugs & Compounds for DPP10-AS1 Gene

No Compound Related Data Available

Transcripts for DPP10-AS1 Gene

mRNA/cDNA for DPP10-AS1 Gene

(16) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DPP10-AS1 Gene

No ASD Table

Relevant External Links for DPP10-AS1 Gene

GeneLoc Exon Structure for
DPP10-AS1
ECgene alternative splicing isoforms for
DPP10-AS1

Expression for DPP10-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DPP10-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DPP10-AS1 Gene

This gene is overexpressed in Testis (x7.6), Brain - Cortex (x6.5), Brain - Frontal Cortex (BA9) (x6.3), Brain - Anterior cingulate cortex (BA24) (x4.4), and Pancreas (x4.0).
genes like me logo Genes that share expression patterns with DPP10-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DPP10-AS1 Gene

Orthologs for DPP10-AS1 Gene

Evolution for DPP10-AS1 Gene

ENSEMBL:
Gene Tree for DPP10-AS1 (if available)
TreeFam:
Gene Tree for DPP10-AS1 (if available)

No data available for Orthologs for DPP10-AS1 Gene

Paralogs for DPP10-AS1 Gene

No data available for Paralogs for DPP10-AS1 Gene

Variants for DPP10-AS1 Gene

Sequence variations from dbSNP and Humsavar for DPP10-AS1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000076995 -- 115,160,112(-) G/A intron_variant
rs1000149712 -- 115,149,683(-) TTTGTTTGT/TTTGT intron_variant
rs1000155269 -- 115,161,183(-) C/T non_coding_transcript_variant
rs1000201055 -- 115,144,853(-) A/G intron_variant
rs1000269465 -- 115,149,431(-) T/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for DPP10-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2554100 CNV deletion 19546169
esv3893137 CNV gain 25118596
nsv1136304 CNV deletion 24896259

Additional Variant Information for DPP10-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DPP10-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DPP10-AS1 Gene

Disorders for DPP10-AS1 Gene

MalaCards: The human disease database

(2) MalaCards diseases for DPP10-AS1 Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
breast cancer
  • breast cancer, familial
colorectal cancer
  • crc
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for DPP10-AS1

genes like me logo Genes that share disorders with DPP10-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DPP10-AS1 Gene

Publications for DPP10-AS1 Gene

  1. Long Noncoding RNA BC032913 as a Novel Therapeutic Target for Colorectal Cancer that Suppresses Metastasis by Upregulating TIMP3. (PMID: 28918047) Lin J … Huang W (Molecular therapy. Nucleic acids 2017) 2 3 58
  2. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PMID: 21697133) Oshikawa M … Kato S (Investigative ophthalmology & visual science 2011) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DPP10-AS1 Gene

Sources for DPP10-AS1 Gene

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