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Aliases for DOCK9-DT Gene

Subcategory (RNA class) for DOCK9-DT Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for DOCK9-DT Gene

  • DOCK9 Divergent Transcript 2 3
  • DOCK9 Antisense RNA 2 (Head To Head) 2 3 5
  • DOCK9 Antisense RNA 2 (Non-Protein Coding) 2 3
  • DOCK9-AS2 3 5
  • DOCK9 Antisense RNA 2 2

External Ids for DOCK9-DT Gene

ORGUL Members for DOCK9-DT Gene

Previous HGNC Symbols for DOCK9-DT Gene

  • DOCK9-AS2

Summaries for DOCK9-DT Gene

GeneCards Summary for DOCK9-DT Gene

DOCK9-DT (DOCK9 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for DOCK9-DT Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DOCK9-DT Gene

Genomics for DOCK9-DT Gene

GeneHancer (GH) Regulatory Elements for DOCK9-DT Gene

Promoters and enhancers for DOCK9-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J099084 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 677 +0.0 24 3.8 PKNOX1 ATF1 SIN3A DMAP1 ZNF2 YY1 ZNF121 GLIS2 ZFP91 SP3 DOCK9-DT DOCK9 GC13M099085
GH13J098971 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 22 -111.2 -111170 8 TCF12 ZNF766 GATA2 ATF7 NCOA1 ATF4 SMARCA4 MYNN KDM1A MEIS2 DOCK9-DT DOCK9 RNU6-83P DOCK9-AS1 GC13M098967 RPL7L1P12
GH13J099044 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 24.2 -40.5 -40520 2.7 SMARCE1 CEBPB MAX DPF2 MNT CEBPG ZNF217 CTBP1 GATA3 POLR2A DOCK9-DT DOCK9 RNU6-83P DOCK9-AS1 GC13M099085
GH13J099052 Enhancer 1.3 Ensembl ENCODE dbSUPER 21.3 -32.2 -32210 3.1 PKNOX1 SMAD1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 E2F8 ATF7 DOCK9 DOCK9-DT DOCK9-AS1 RNU6-83P GC13M099085
GH13J098992 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 24.6 -93.6 -93623 1.3 CEBPB EBF1 MEF2B CEBPG ATF2 ATF4 ZNF316 ATF7 ZBTB33 IKZF2 GC13P098991 GC13P098992 DOCK9-DT DOCK9 RNU6-83P DOCK9-AS1 GC13P099026
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DOCK9-DT on UCSC Golden Path with GeneCards custom track

Genomic Locations for DOCK9-DT Gene

Genomic Locations for DOCK9-DT Gene
chr13:99,086,723-99,088,625
(GRCh38/hg38)
Size:
1,903 bases
Orientation:
Plus strand
chr13:99,740,073-99,740,879
(GRCh37/hg19)

Genomic View for DOCK9-DT Gene

Genes around DOCK9-DT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DOCK9-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DOCK9-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DOCK9-DT Gene

Function for DOCK9-DT Gene

Phenotypes From GWAS Catalog for DOCK9-DT Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DOCK9-DT Gene

Localization for DOCK9-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DOCK9-DT Gene

Pathways & Interactions for DOCK9-DT Gene

SuperPathways for DOCK9-DT Gene

No Data Available

Interacting Proteins for DOCK9-DT Gene

Gene Ontology (GO) - Biological Process for DOCK9-DT Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DOCK9-DT Gene

Drugs & Compounds for DOCK9-DT Gene

No Compound Related Data Available

Transcripts for DOCK9-DT Gene

mRNA/cDNA for DOCK9-DT Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DOCK9-DT Gene

No ASD Table

Relevant External Links for DOCK9-DT Gene

GeneLoc Exon Structure for
DOCK9-DT
ECgene alternative splicing isoforms for
DOCK9-DT

Expression for DOCK9-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DOCK9-DT Gene

Orthologs for DOCK9-DT Gene

Evolution for DOCK9-DT Gene

ENSEMBL:
Gene Tree for DOCK9-DT (if available)
TreeFam:
Gene Tree for DOCK9-DT (if available)

No data available for Orthologs for DOCK9-DT Gene

Paralogs for DOCK9-DT Gene

No data available for Paralogs for DOCK9-DT Gene

Variants for DOCK9-DT Gene

Sequence variations from dbSNP and Humsavar for DOCK9-DT Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000901541 -- 99,085,720(+) T/C upstream_transcript_variant
rs1001297817 -- 99,088,320(+) G/C non_coding_transcript_variant
rs1001348355 -- 99,088,524(+) A/G non_coding_transcript_variant
rs1001636049 -- 99,087,625(+) TCT/T non_coding_transcript_variant
rs1001667106 -- 99,087,329(+) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DOCK9-DT Gene

Variant ID Type Subtype PubMed ID
dgv3358n54 CNV gain 21841781
dgv3359n54 CNV loss 21841781
dgv3360n54 CNV gain 21841781
dgv3361n54 CNV gain 21841781
dgv3362n54 CNV gain 21841781
esv27384 CNV loss 19812545
esv3892433 CNV gain 25118596
nsv1043886 CNV loss 25217958
nsv1050094 CNV gain 25217958
nsv1069767 CNV deletion 25765185
nsv562927 CNV gain 21841781
nsv562934 CNV gain+loss 21841781
nsv562935 CNV gain 21841781
nsv562942 CNV loss 21841781

Additional Variant Information for DOCK9-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DOCK9-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DOCK9-DT Gene

Disorders for DOCK9-DT Gene

Additional Disease Information for DOCK9-DT

No disorders were found for DOCK9-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DOCK9-DT Gene

Publications for DOCK9-DT Gene

  1. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian SL … Gershon ES (Genomics 2002) 3 58

Products for DOCK9-DT Gene

Sources for DOCK9-DT Gene

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