Free for academic non-profit institutions. Other users need a Commercial license
Aliases for DNMT3AP1 Gene
Previous GeneCards Identifiers for DNMT3AP1 Gene
- GC02U900736
- GC02M066900
- GC02M067048
Summaries for DNMT3AP1 Gene
GeneCards Summary for DNMT3AP1 Gene
DNMT3AP1 (DNA Methyltransferase 3A Pseudogene 1) is a Pseudogene.
Additional gene information for DNMT3AP1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DNMT3AP1 Gene
Genomics for DNMT3AP1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for DNMT3AP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH02J066805 | Enhancer | 0.5 | UCNEbase Ensembl | 0.4 | +16.0 | 16016 | 1.8 | DNMT3AP1 lnc-C1D-15 lnc-MEIS1-9 LINC01798 MEIS1 ETAA1 | ||
| GH02J066790 | Enhancer | 0.6 | Ensembl ENCODE | 0.3 | +30.3 | 30347 | 0.7 | FOS NR2F2 BHLHE40 RXRA | lnc-C1D-15 lnc-MEIS1-9 DNMT3AP1 LINC01798 MEIS1 ETAA1 | |
| GH02J066803 | Enhancer | 0.2 | ENCODE | 0.4 | +17.8 | 17836 | 0.8 | DNMT3AP1 lnc-C1D-15 lnc-MEIS1-9 LINC01798 MEIS1 ETAA1 | ||
| GH02J066789 | Enhancer | 0.2 | Ensembl | 0.3 | +31.6 | 31617 | 0.6 | lnc-C1D-15 lnc-MEIS1-9 DNMT3AP1 LINC01798 MEIS1 ETAA1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around DNMT3AP1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for DNMT3AP1 Gene
Genomic Locations for DNMT3AP1 Gene
- chr2:66,819,925-66,821,517
- (GRCh38/hg38)
- Size:
- 1,593 bases
- Orientation:
- Minus strand
- chr2:67,047,013-67,049,760
- (GRCh37/hg19)
- Size:
- 2,748 bases
- Orientation:
- Minus strand
Genomic View for DNMT3AP1 Gene
Genes around DNMT3AP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 2p14 by HGNC
- 2p14 by Entrez Gene
DNMT3AP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for DNMT3AP1 Gene
Proteins for DNMT3AP1 Gene
Post-translational modifications for DNMT3AP1 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DNMT3AP1
- Origene Custom Protein Services for DNMT3AP1
No data available for DME Specific Peptides for DNMT3AP1 Gene
Domains & Families for DNMT3AP1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DNMT3AP1 Gene
Function for DNMT3AP1 Gene
Phenotypes From GWAS Catalog for DNMT3AP1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for DNMT3AP1 - Select products 50% OFF >
- * DNMT3AP1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for DNMT3AP1
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for DNMT3AP1 - Select products 50% OFF >
- * DNMT3AP1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNMT3AP1 Gene
Localization for DNMT3AP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DNMT3AP1 Gene
Transcripts for DNMT3AP1 Gene
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for DNMT3AP1 - Select products 50% OFF >
- * DNMT3AP1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for DNMT3AP1
miRNA Products
Inhibitory RNA Products
Clone Products
- Applied Biological Materials (abm): Clones for DNMT3AP1 - Select products 50% OFF >
- * DNMT3AP1 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for DNMT3AP1 Gene
- GeneLoc Exon Structure for
- DNMT3AP1
No data available for mRNA/cDNA for DNMT3AP1 Gene
Expression for DNMT3AP1 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNMT3AP1 Gene
Orthologs for DNMT3AP1 Gene
No data available for Orthologs and Evolution for DNMT3AP1 Gene
Paralogs for DNMT3AP1 Gene
No data available for Paralogs for DNMT3AP1 Gene
Variants for DNMT3AP1 Gene
Additional Variant Information for DNMT3AP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- DNMT3AP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DNMT3AP1 Gene
Disorders for DNMT3AP1 Gene
Additional Disease Information for DNMT3AP1
- Genetic Association Database
- (GAD)
No disorders were found for DNMT3AP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNMT3AP1 Gene
Publications for DNMT3AP1 Gene
- Identification of 11 pseudogenes in the DNA methyltransferase gene family in rodents and humans and implications for the functional loci. (PMID: 15203217) Lees-Murdock DJ … Walsh CP (Genomics 2004) 2 3
- Genome-wide diet-gene interaction analyses for risk of colorectal cancer. (PMID: 24743840) Figueiredo JC … GECCO (PLoS genetics 2014) 3
- Decreased DNA methyltransferase 3A and 3B mRNA expression in peripheral blood mononuclear cells and increased plasma SAH concentration in adult patients with idiopathic thrombocytopenic purpura. (PMID: 18683034) Tao J … Yang R (Journal of clinical immunology 2008) 3
- Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41
- Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41
ExternalLinks
Products for DNMT3AP1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DNMT3AP1
- Origene Custom Protein Services for DNMT3AP1
- Browse OriGene Inhibitory RNA Products For DNMT3AP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for DNMT3AP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For DNMT3AP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for DNMT3AP1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for DNMT3AP1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for DNMT3AP1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for DNMT3AP1
Sources for DNMT3AP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB