Aliases for DNMT3AP1 Gene

Aliases for DNMT3AP1 Gene

  • DNA Methyltransferase 3A Pseudogene 1 2 3

External Ids for DNMT3AP1 Gene

Previous GeneCards Identifiers for DNMT3AP1 Gene

  • GC02U900736
  • GC02M066900
  • GC02M067048

Summaries for DNMT3AP1 Gene

GeneCards Summary for DNMT3AP1 Gene

DNMT3AP1 (DNA Methyltransferase 3A Pseudogene 1) is a Pseudogene.

Additional gene information for DNMT3AP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DNMT3AP1 Gene

Genomics for DNMT3AP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DNMT3AP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J066805 Enhancer 0.5 UCNEbase Ensembl 0.4 +16.0 16016 1.8 DNMT3AP1 lnc-C1D-15 lnc-MEIS1-9 LINC01798 MEIS1 ETAA1
GH02J066790 Enhancer 0.6 Ensembl ENCODE 0.3 +30.3 30347 0.7 FOS NR2F2 BHLHE40 RXRA lnc-C1D-15 lnc-MEIS1-9 DNMT3AP1 LINC01798 MEIS1 ETAA1
GH02J066803 Enhancer 0.2 ENCODE 0.4 +17.8 17836 0.8 DNMT3AP1 lnc-C1D-15 lnc-MEIS1-9 LINC01798 MEIS1 ETAA1
GH02J066789 Enhancer 0.2 Ensembl 0.3 +31.6 31617 0.6 lnc-C1D-15 lnc-MEIS1-9 DNMT3AP1 LINC01798 MEIS1 ETAA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DNMT3AP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DNMT3AP1 Gene

Genomic Locations for DNMT3AP1 Gene
chr2:66,819,925-66,821,517
(GRCh38/hg38)
Size:
1,593 bases
Orientation:
Minus strand
chr2:67,047,013-67,049,760
(GRCh37/hg19)
Size:
2,748 bases
Orientation:
Minus strand

Genomic View for DNMT3AP1 Gene

Genes around DNMT3AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNMT3AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNMT3AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNMT3AP1 Gene

Proteins for DNMT3AP1 Gene

Post-translational modifications for DNMT3AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DNMT3AP1 Gene

Domains & Families for DNMT3AP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DNMT3AP1 Gene

Function for DNMT3AP1 Gene

Phenotypes From GWAS Catalog for DNMT3AP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNMT3AP1 Gene

Localization for DNMT3AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DNMT3AP1 Gene

Pathways & Interactions for DNMT3AP1 Gene

PathCards logo

SuperPathways for DNMT3AP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DNMT3AP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DNMT3AP1 Gene

Drugs & Compounds for DNMT3AP1 Gene

No Compound Related Data Available

Transcripts for DNMT3AP1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for DNMT3AP1 Gene

No ASD Table

Relevant External Links for DNMT3AP1 Gene

GeneLoc Exon Structure for
DNMT3AP1

No data available for mRNA/cDNA for DNMT3AP1 Gene

Expression for DNMT3AP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DNMT3AP1 Gene

genes like me logo Genes that share expression patterns with DNMT3AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNMT3AP1 Gene

Orthologs for DNMT3AP1 Gene

No data available for Orthologs and Evolution for DNMT3AP1 Gene

Paralogs for DNMT3AP1 Gene

No data available for Paralogs for DNMT3AP1 Gene

Variants for DNMT3AP1 Gene

Additional Variant Information for DNMT3AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNMT3AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DNMT3AP1 Gene

Disorders for DNMT3AP1 Gene

Additional Disease Information for DNMT3AP1

Genetic Association Database
(GAD)

No disorders were found for DNMT3AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNMT3AP1 Gene

Publications for DNMT3AP1 Gene

  1. Identification of 11 pseudogenes in the DNA methyltransferase gene family in rodents and humans and implications for the functional loci. (PMID: 15203217) Lees-Murdock DJ … Walsh CP (Genomics 2004) 2 3
  2. Genome-wide diet-gene interaction analyses for risk of colorectal cancer. (PMID: 24743840) Figueiredo JC … GECCO (PLoS genetics 2014) 3
  3. Decreased DNA methyltransferase 3A and 3B mRNA expression in peripheral blood mononuclear cells and increased plasma SAH concentration in adult patients with idiopathic thrombocytopenic purpura. (PMID: 18683034) Tao J … Yang R (Journal of clinical immunology 2008) 3
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41

Products for DNMT3AP1 Gene

Sources for DNMT3AP1 Gene