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Aliases for DNAJC3-AS1 Gene

Subcategory (RNA class) for DNAJC3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DNAJC3-AS1 Gene

  • DNAJC3 Antisense RNA 1 (Head To Head) 2 3 5
  • DNAJC3 Antisense RNA 1 (Non-Protein Coding) 2
  • DNAJC3 Antisense RNA 1 2

External Ids for DNAJC3-AS1 Gene

Previous GeneCards Identifiers for DNAJC3-AS1 Gene

  • GC13M096326
  • GC13M096300

Summaries for DNAJC3-AS1 Gene

GeneCards Summary for DNAJC3-AS1 Gene

DNAJC3-AS1 (DNAJC3 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DNAJC3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAJC3-AS1 Gene

Genomics for DNAJC3-AS1 Gene

GeneHancer (GH) Regulatory Elements for DNAJC3-AS1 Gene

Promoters and enhancers for DNAJC3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I095675 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 0.0 -10 3.7 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 DNAJC3 DNAJC3-AS1 DZIP1 UGGT2
GH13I095678 Enhancer 0.4 ENCODE 550.8 -2.0 -1972 0.3 ZNF362 MYNN DNAJC3 DNAJC3-AS1 DZIP1 MTND5P2
GH13I095641 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 18.7 +35.1 35130 1.2 MXI1 RFX1 RXRA SAP130 MLX ARID4B YY1 SKI RFX3 HNF4G DZIP1 DNAJC3-AS1 DNAJC3 GC13M095581
GH13I095642 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 10.7 +32.9 32855 2.3 PKNOX1 ARID4B SIN3A ZNF76 ZNF48 ZEB1 ZNF335 GLIS2 ZNF366 EGR2 DZIP1 UGGT2 DNAJC3-AS1 CLDN10 GC13M095581
GH13I095656 Enhancer 0.6 ENCODE 12.1 +20.1 20138 1.4 MEIS2 PKNOX1 MTA2 TEAD4 TAL1 CBFA2T3 TCF12 NCOR1 HDAC2 ZSCAN5C DNAJC3 DNAJC3-AS1 CLDN10 DZIP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DNAJC3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DNAJC3-AS1 Gene

Genomic Locations for DNAJC3-AS1 Gene
chr13:95,648,733-95,676,960
(GRCh38/hg38)
Size:
28,228 bases
Orientation:
Minus strand
chr13:96,300,987-96,329,179
(GRCh37/hg19)

Genomic View for DNAJC3-AS1 Gene

Genes around DNAJC3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNAJC3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNAJC3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAJC3-AS1 Gene

Proteins for DNAJC3-AS1 Gene

Post-translational modifications for DNAJC3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DNAJC3-AS1 Gene

Domains & Families for DNAJC3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DNAJC3-AS1 Gene

Function for DNAJC3-AS1 Gene

Phenotypes From GWAS Catalog for DNAJC3-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNAJC3-AS1 Gene

Localization for DNAJC3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DNAJC3-AS1 Gene

Pathways & Interactions for DNAJC3-AS1 Gene

SuperPathways for DNAJC3-AS1 Gene

No Data Available

Interacting Proteins for DNAJC3-AS1 Gene

Gene Ontology (GO) - Biological Process for DNAJC3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DNAJC3-AS1 Gene

Drugs & Compounds for DNAJC3-AS1 Gene

No Compound Related Data Available

Transcripts for DNAJC3-AS1 Gene

mRNA/cDNA for DNAJC3-AS1 Gene

(5) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DNAJC3-AS1 Gene

DNAJC3 antisense RNA 1 (head to head):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DNAJC3-AS1 Gene

No ASD Table

Relevant External Links for DNAJC3-AS1 Gene

GeneLoc Exon Structure for
DNAJC3-AS1
ECgene alternative splicing isoforms for
DNAJC3-AS1

Expression for DNAJC3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DNAJC3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DNAJC3-AS1 Gene

This gene is overexpressed in Pituitary (x4.1).

SOURCE GeneReport for Unigene cluster for DNAJC3-AS1 Gene:

Hs.594844
genes like me logo Genes that share expression patterns with DNAJC3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNAJC3-AS1 Gene

Orthologs for DNAJC3-AS1 Gene

Evolution for DNAJC3-AS1 Gene

ENSEMBL:
Gene Tree for DNAJC3-AS1 (if available)
TreeFam:
Gene Tree for DNAJC3-AS1 (if available)

No data available for Orthologs for DNAJC3-AS1 Gene

Paralogs for DNAJC3-AS1 Gene

No data available for Paralogs for DNAJC3-AS1 Gene

Variants for DNAJC3-AS1 Gene

Sequence variations from dbSNP and Humsavar for DNAJC3-AS1 Gene

SNP ID Clin Chr 13 pos Variation AA Info Type
rs1000511287 -- 95,673,893(-) G/A non_coding_transcript_variant
rs1000730351 -- 95,673,636(-) T/C non_coding_transcript_variant
rs1001550024 -- 95,676,984(-) C/T upstream_transcript_variant
rs1001949457 -- 95,673,383(-) C/G non_coding_transcript_variant
rs1002722840 -- 95,677,199(-) C/G upstream_transcript_variant

Additional Variant Information for DNAJC3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNAJC3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DNAJC3-AS1 Gene

Disorders for DNAJC3-AS1 Gene

Additional Disease Information for DNAJC3-AS1

No disorders were found for DNAJC3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNAJC3-AS1 Gene

Publications for DNAJC3-AS1 Gene

No publications were found for DNAJC3-AS1 Gene.

Products for DNAJC3-AS1 Gene

Sources for DNAJC3-AS1 Gene

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