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Aliases for DNAJB7 Gene

Aliases for DNAJB7 Gene

  • DnaJ Heat Shock Protein Family (Hsp40) Member B7 2 3 5
  • DnaJ (Hsp40) Homolog, Subfamily B, Member 7 2 3
  • HSC3 3 4
  • DnaJ Homolog Subfamily B Member 7 3
  • Novel DnaJ Domain Protein 3
  • DJ5 3

External Ids for DNAJB7 Gene

Previous GeneCards Identifiers for DNAJB7 Gene

  • GC22M039499
  • GC22M039501
  • GC22M039581
  • GC22M041255
  • GC22M024217

Summaries for DNAJB7 Gene

Entrez Gene Summary for DNAJB7 Gene

  • The protein encoded by this intronless gene belongs to the evolutionarily conserved DNAJ/HSP40 family of proteins, which regulate molecular chaperone activity by stimulating ATPase activity. DNAJ proteins may have up to 3 distinct domains: a conserved 70-amino acid J domain, usually at the N terminus; a glycine/phenylalanine (G/F)-rich region; and a cysteine-rich domain containing 4 motifs resembling a zinc finger domain.[provided by RefSeq, Mar 2011]

GeneCards Summary for DNAJB7 Gene

DNAJB7 (DnaJ Heat Shock Protein Family (Hsp40) Member B7) is a Protein Coding gene. Diseases associated with DNAJB7 include Oral Cavity Cancer. Gene Ontology (GO) annotations related to this gene include chaperone binding. An important paralog of this gene is DNAJB6.

UniProtKB/Swiss-Prot for DNAJB7 Gene

  • Probably acts as a co-chaperone.

Additional gene information for DNAJB7 Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAJB7 Gene

Genomics for DNAJB7 Gene

GeneHancer (GH) Regulatory Elements for DNAJB7 Gene

Promoters and enhancers for DNAJB7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J040863 Enhancer 1 FANTOM5 Ensembl ENCODE 650.7 -1.9 -1918 0.5 ZNF664 SRF RFX1 JUN GABPB1 BMI1 SPI1 PIR48000 DNAJB7 SLC25A17 XPNPEP3 GC22P040894
GH22J040709 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 18.8 +150.0 149953 6.3 MLX FEZF1 YY1 ZNF213 ZNF416 SP3 MEF2D ZNF610 GLIS1 RCOR2 EP300 PHF5A XRCC6 SLC25A17 L3MBTL2 DNAJB7 HMGN2P10 SNU13 ZC3H7B ENSG00000235513
GH22J040950 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 12.5 -89.4 -89441 3.1 HDGF PKNOX1 SMAD1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 RBX1 EP300 XRCC6 EP300-AS1 ADSL DNAJB7 XPNPEP3 ST13 GC22P040976
GH22J040042 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 12.4 +817.9 817886 3.9 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ENSG00000261202 TNRC6B DNAJB7 ADSL MIEF1 LOC100313968 PIR40250 GC22P040039 FAM83F
GH22J041443 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.3 -584.6 -584590 5.9 MLX ZFP64 FEZF1 DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 ZNF143 ACO2 TOB2 LOC105373043 L3MBTL2 EP300 PHF5A ZC3H7B SLC25A17 XRCC6 ENSG00000232754
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DNAJB7 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the DNAJB7 gene promoter:
  • PPAR-gamma2
  • PPAR-gamma1
  • C/EBPalpha
  • AREB6
  • Lmo2
  • Elk-1
  • Evi-1
  • HNF-1A
  • HNF-1
  • Pax-3

Genomic Locations for DNAJB7 Gene

Genomic Locations for DNAJB7 Gene
chr22:40,859,549-40,862,126
(GRCh38/hg38)
Size:
2,578 bases
Orientation:
Minus strand
chr22:41,255,553-41,258,130
(GRCh37/hg19)
Size:
2,578 bases
Orientation:
Minus strand

Genomic View for DNAJB7 Gene

Genes around DNAJB7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNAJB7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNAJB7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAJB7 Gene

Proteins for DNAJB7 Gene

  • Protein details for DNAJB7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z6W7-DNJB7_HUMAN
    Recommended name:
    DnaJ homolog subfamily B member 7
    Protein Accession:
    Q7Z6W7
    Secondary Accessions:
    • Q2M220
    • Q5H904
    • Q8WYJ7

    Protein attributes for DNAJB7 Gene

    Size:
    309 amino acids
    Molecular mass:
    35434 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DNAJB7 Gene

Post-translational modifications for DNAJB7 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for DNAJB7 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for DNAJB7 Gene

Domains & Families for DNAJB7 Gene

Gene Families for DNAJB7 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for DNAJB7 Gene

Suggested Antigen Peptide Sequences for DNAJB7 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DNAJB7: view

No data available for UniProtKB/Swiss-Prot for DNAJB7 Gene

Function for DNAJB7 Gene

Molecular function for DNAJB7 Gene

UniProtKB/Swiss-Prot Function:
Probably acts as a co-chaperone.

Phenotypes From GWAS Catalog for DNAJB7 Gene

Gene Ontology (GO) - Molecular Function for DNAJB7 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0051087 chaperone binding IPI 21231916
genes like me logo Genes that share ontologies with DNAJB7: view
genes like me logo Genes that share phenotypes with DNAJB7: view

Animal Models for DNAJB7 Gene

MGI Knock Outs for DNAJB7:
  • Dnajb7 Dnajb7<tm1.1(KOMP)Vlcg>

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for DNAJB7

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for DNAJB7 Gene

Localization for DNAJB7 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DNAJB7 gene
Compartment Confidence
nucleus 3
cytosol 3
extracellular 2
mitochondrion 2
plasma membrane 1
cytoskeleton 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DNAJB7 Gene

Pathways & Interactions for DNAJB7 Gene

SuperPathways for DNAJB7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DNAJB7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DNAJB7 Gene

Drugs & Compounds for DNAJB7 Gene

No Compound Related Data Available

Transcripts for DNAJB7 Gene

mRNA/cDNA for DNAJB7 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DNAJB7 Gene

DnaJ (Hsp40) homolog, subfamily B, member 7:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for DNAJB7

Alternative Splicing Database (ASD) splice patterns (SP) for DNAJB7 Gene

No ASD Table

Relevant External Links for DNAJB7 Gene

GeneLoc Exon Structure for
DNAJB7
ECgene alternative splicing isoforms for
DNAJB7

Expression for DNAJB7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DNAJB7 Gene

Protein differential expression in normal tissues from HIPED for DNAJB7 Gene

This gene is overexpressed in Fetal gut (30.4) and Pancreas (12.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for DNAJB7 Gene



NURSA nuclear receptor signaling pathways regulating expression of DNAJB7 Gene:

DNAJB7

SOURCE GeneReport for Unigene cluster for DNAJB7 Gene:

Hs.585042

Evidence on tissue expression from TISSUES for DNAJB7 Gene

  • Nervous system(4.1)
genes like me logo Genes that share expression patterns with DNAJB7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNAJB7 Gene

Orthologs for DNAJB7 Gene

This gene was present in the common ancestor of animals.

Orthologs for DNAJB7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia DNAJB7 34 33
  • 98.81 (n)
OneToOne
dog
(Canis familiaris)
Mammalia DNAJB7 34 33
  • 85.34 (n)
OneToOne
cow
(Bos Taurus)
Mammalia DNAJB7 34 33
  • 83.72 (n)
OneToOne
rat
(Rattus norvegicus)
Mammalia Dnajb7 33
  • 80.63 (n)
mouse
(Mus musculus)
Mammalia Dnajb7 16 34 33
  • 79.65 (n)
oppossum
(Monodelphis domestica)
Mammalia DNAJB7 34
  • 67 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 54 (a)
OneToMany
chicken
(Gallus gallus)
Aves DNAJB6 34
  • 53 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 34
  • 55 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii dnajb6b 34
  • 41 (a)
ManyToMany
dnajb6a 34
  • 37 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta mrj 34
  • 25 (a)
OneToMany
Species where no ortholog for DNAJB7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for DNAJB7 Gene

ENSEMBL:
Gene Tree for DNAJB7 (if available)
TreeFam:
Gene Tree for DNAJB7 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for DNAJB7: view image

Paralogs for DNAJB7 Gene

Paralogs for DNAJB7 Gene

(4) SIMAP similar genes for DNAJB7 Gene using alignment to 1 proteins:

  • DNJB7_HUMAN
genes like me logo Genes that share paralogs with DNAJB7: view

Variants for DNAJB7 Gene

Sequence variations from dbSNP and Humsavar for DNAJB7 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1002902048 -- 40,862,696(-) T/G upstream_transcript_variant
rs1003247107 -- 40,861,521(-) T/A coding_sequence_variant, synonymous_variant
rs1004093756 -- 40,863,122(-) T/C upstream_transcript_variant
rs1004936576 -- 40,860,688(-) T/C 3_prime_UTR_variant
rs1005250864 -- 40,861,996(-) TTTT/TTTTT 5_prime_UTR_variant

Structural Variations from Database of Genomic Variants (DGV) for DNAJB7 Gene

Variant ID Type Subtype PubMed ID
nsv1124863 CNV duplication 24896259

Variation tolerance for DNAJB7 Gene

Residual Variation Intolerance Score: 74.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.52; 64.71% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for DNAJB7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNAJB7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DNAJB7 Gene

Disorders for DNAJB7 Gene

MalaCards: The human disease database

(1) MalaCards diseases for DNAJB7 Gene - From: DISEASES

Disorder Aliases PubMed IDs
oral cavity cancer
  • malignant neoplasm of anterior portion of floor of mouth
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for DNAJB7

genes like me logo Genes that share disorders with DNAJB7: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DNAJB7 Gene

Publications for DNAJB7 Gene

  1. A genome annotation-driven approach to cloning the human ORFeome. (PMID: 15461802) Collins JE … Dunham I (Genome biology 2004) 3 4 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  4. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I … O'Brien KP (Nature 1999) 3 4 58
  5. The diverse members of the mammalian HSP70 machine show distinct chaperone-like activities. (PMID: 21231916) Hageman J … Kampinga HH (The Biochemical journal 2011) 3 58

Products for DNAJB7 Gene

Sources for DNAJB7 Gene

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