Aliases for DM1-AS Gene

Subcategory (RNA class) for DM1-AS Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for DM1-AS Gene

  • DM1 Locus Antisense RNA 2 3 5
  • HSALNG0126602 169
  • NONHSAG026053 94
  • DM1-AS 2

External Ids for DM1-AS Gene

Summaries for DM1-AS Gene

GeneCards Summary for DM1-AS Gene

DM1-AS (DM1 Locus Antisense RNA) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DM1-AS include Branchiootorenal Syndrome 2.

Additional gene information for DM1-AS Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DM1-AS Gene

Genomics for DM1-AS Gene

GeneHancer (GH) Regulatory Elements for DM1-AS Gene

Promoters and enhancers for DM1-AS Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DM1-AS on UCSC Golden Path with GeneCards custom track

Genomic Locations for DM1-AS Gene

Genomic Locations for DM1-AS Gene
chr19:45,767,796-45,772,818
(GRCh38/hg38)
Size:
5,023 bases
Orientation:
Plus strand
chr19:46,271,054-46,275,762
(GRCh37/hg19)
Size:
4,709 bases
Orientation:
Plus strand

Genomic View for DM1-AS Gene

Genes around DM1-AS on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DM1-AS Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DM1-AS Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DM1-AS Gene

Proteins for DM1-AS Gene

Post-translational modifications for DM1-AS Gene

No Post-translational modifications

No data available for DME Specific Peptides for DM1-AS Gene

Domains & Families for DM1-AS Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DM1-AS Gene

Function for DM1-AS Gene

Phenotypes From GWAS Catalog for DM1-AS Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DM1-AS Gene

Localization for DM1-AS Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DM1-AS Gene

Pathways & Interactions for DM1-AS Gene

PathCards logo

SuperPathways for DM1-AS Gene

No Data Available

Gene Ontology (GO) - Biological Process for DM1-AS Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DM1-AS Gene

Drugs & Compounds for DM1-AS Gene

No Compound Related Data Available

Transcripts for DM1-AS Gene

mRNA/cDNA for DM1-AS Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(10) RNACentral transcripts :
(8) NONCODE transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for DM1-AS Gene

No ASD Table

Relevant External Links for DM1-AS Gene

GeneLoc Exon Structure for
DM1-AS
ECgene alternative splicing isoforms for
DM1-AS

Expression for DM1-AS Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DM1-AS Gene

Orthologs for DM1-AS Gene

Evolution for DM1-AS Gene

ENSEMBL:
Gene Tree for DM1-AS (if available)
TreeFam:
Gene Tree for DM1-AS (if available)

No data available for Orthologs for DM1-AS Gene

Paralogs for DM1-AS Gene

No data available for Paralogs for DM1-AS Gene

Variants for DM1-AS Gene

Sequence variations from dbSNP and Humsavar for DM1-AS Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1003871860 uncertain-significance, Steinert myotonic dystrophy syndrome 45,770,541(+) C/A/G intron_variant
rs1057519372 uncertain-significance, Branchiootorenal syndrome 2 45,766,698(+) C/T upstream_transcript_variant
rs1310210930 uncertain-significance, Steinert myotonic dystrophy syndrome 45,770,589(+) C/A/T intron_variant
rs536277584 uncertain-significance, Myotonic dystrophy 45,771,011(+) G/A/C intron_variant
rs78771765 likely-benign, Myotonic dystrophy 45,771,796(+) G/A non_coding_transcript_variant

Additional Variant Information for DM1-AS Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DM1-AS

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DM1-AS Gene

Disorders for DM1-AS Gene

MalaCards: The human disease database

(1) MalaCards diseases for DM1-AS Gene - From: GeneCards

Disorder Aliases PubMed IDs
branchiootorenal syndrome 2
  • bor2
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for DM1-AS

genes like me logo Genes that share disorders with DM1-AS: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DM1-AS Gene

Publications for DM1-AS Gene

  1. Antisense transcription of the myotonic dystrophy locus yields low-abundant RNAs with and without (CAG)n repeat. (PMID: 28102759) Gudde AEEG … Wansink DG (RNA biology 2017) 2 3 56

Products for DM1-AS Gene

Sources for DM1-AS Gene