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Aliases for DLGAP1-AS4 Gene
Subcategory (RNA class) for DLGAP1-AS4 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for DLGAP1-AS4 Gene
External Ids for DLGAP1-AS4 Gene
- HGNC: 44333
- Entrez Gene: 101410534
- Ensembl: ENSG00000263878
Previous GeneCards Identifiers for DLGAP1-AS4 Gene
- GC00U934039
Summaries for DLGAP1-AS4 Gene
GeneCards Summary for DLGAP1-AS4 Gene
DLGAP1-AS4 (DLGAP1 Antisense RNA 4) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for DLGAP1-AS4 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DLGAP1-AS4 Gene
Genomics for DLGAP1-AS4 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for DLGAP1-AS4 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J003963 | Enhancer | 0.2 | FANTOM5 | 600.7 | +1.1 | 1052 | 0.4 | DLGAP1-AS4 DLGAP1 GAPDHP66 TGIF1 | ||
| GH18J003959 | Enhancer | 0.2 | Ensembl | 600.7 | -1.9 | -1852 | 1.4 | DLGAP1-AS4 piR-61532-123 DLGAP1 TGIF1 | ||
| GH18J003965 | Enhancer | 1.2 | Ensembl ENCODE dbSUPER | 0.4 | +5.2 | 5157 | 3 | PRDM10 ZNF629 ZNF692 PRDM1 ZSCAN4 PATZ1 ZNF501 ZNF600 ZNF148 SCRT2 | DLGAP1-AS4 GAPDHP66 DLGAP1 TGIF1 | |
| GH18J003982 | Enhancer | 1.2 | Ensembl ENCODE dbSUPER | 0.4 | +22.2 | 22248 | 4.8 | PRDM10 ZNF629 PKNOX1 TCF12 ZBTB44 SP1 ZNF639 ZNF766 HMBOX1 KLF7 | GAPDHP66 piR-48209-300 DLGAP1-AS4 lnc-MYOM1-12 DLGAP1 lnc-AKAIN1-9 TGIF1 | |
| GH18J003996 | Enhancer | 0.9 | Ensembl ENCODE dbSUPER | 0.3 | +33.2 | 33248 | 0.8 | CTCF RAD21 TRIM22 RUNX3 SMC3 ZNF384 EBF1 ZNF654 TBX21 ZNF664 | piR-48209-300 DLGAP1-AS4 piR-46323 lnc-MYOM1-12 DLGAP1 lnc-AKAIN1-9 TGIF1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around DLGAP1-AS4 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for DLGAP1-AS4 Gene
Genomic Locations for DLGAP1-AS4 Gene
- chr18:3,962,353-4,024,150
- (GRCh38/hg38)
- Size:
- 61,798 bases
- Orientation:
- Plus strand
- chr18:3,962,353-4,013,943
- (GRCh37/hg19)
- Size:
- 51,591 bases
- Orientation:
- Plus strand
Genomic View for DLGAP1-AS4 Gene
Genes around DLGAP1-AS4 on UCSC Golden Path with GeneCards custom track
DLGAP1-AS4 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 18p11.31 by HGNC
- 18p11.31 by Entrez Gene
- 18p11.31 by Ensembl
DLGAP1-AS4 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for DLGAP1-AS4 Gene
Proteins for DLGAP1-AS4 Gene
Post-translational modifications for DLGAP1-AS4 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DLGAP1-AS4
- Origene Custom Protein Services for DLGAP1-AS4
No data available for DME Specific Peptides for DLGAP1-AS4 Gene
Domains & Families for DLGAP1-AS4 Gene
Gene Families for DLGAP1-AS4 Gene
- HGNC:
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DLGAP1-AS4 Gene
Function for DLGAP1-AS4 Gene
Phenotypes From GWAS Catalog for DLGAP1-AS4 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for DLGAP1-AS4
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLGAP1-AS4 Gene
Localization for DLGAP1-AS4 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DLGAP1-AS4 Gene
Transcripts for DLGAP1-AS4 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for DLGAP1-AS4 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00005527E9_9606 | lncRNA | 757 | 5 |
HGNC: 44333, RefSeq: NR_102696, LncBook: HSALNT0247242, LNCipedia: DLGAP1-AS4:1, NONCODE: NONHSAT057021.2, |
| URS0000EF4BE4_9606 | lncRNA | 1817 | 1 |
Ensembl: ENST00000662752 (view in UCSC) , |
| URS0000EF1AD6_9606 | lncRNA | 1526 | 1 |
Ensembl: ENST00000652891 (view in UCSC) , |
| URS0000EEC5AC_9606 | lncRNA | 925 | 1 |
Ensembl: ENST00000661068 (view in UCSC) , |
| URS0000EF1520_9606 | lncRNA | 837 | 1 |
Ensembl: ENST00000662697 (view in UCSC) , |
DLGAP1-AS4 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for DLGAP1-AS4 Gene
- 3 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for DLGAP1-AS4
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for DLGAP1-AS4 Gene
- GeneLoc Exon Structure for
- DLGAP1-AS4
Expression for DLGAP1-AS4 Gene
mRNA differential expression in normal tissues according to GTEx for DLGAP1-AS4 Gene
This gene is overexpressed in Brain - Cortex (x16.1), Brain - Frontal Cortex (BA9) (x15.1), and Brain - Anterior cingulate cortex (BA24) (x11.9).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DLGAP1-AS4
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DLGAP1-AS4 Gene
Orthologs for DLGAP1-AS4 Gene
No data available for Orthologs for DLGAP1-AS4 Gene
Paralogs for DLGAP1-AS4 Gene
No data available for Paralogs for DLGAP1-AS4 Gene
Variants for DLGAP1-AS4 Gene
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv134e55 | CNV | gain | 17911159 |
| dgv184n21 | CNV | gain | 19592680 |
| esv1587054 | CNV | deletion | 17803354 |
| esv1608190 | CNV | insertion | 17803354 |
| esv2282661 | CNV | deletion | 18987734 |
| esv2432132 | CNV | deletion | 19546169 |
| esv2577067 | CNV | deletion | 19546169 |
| esv2658035 | CNV | deletion | 23128226 |
| esv2662794 | CNV | deletion | 23128226 |
| esv2716699 | CNV | deletion | 23290073 |
| esv2758710 | CNV | gain | 17122850 |
| esv3144901 | CNV | deletion | 24192839 |
| esv3554973 | CNV | deletion | 23714750 |
| esv3641611 | CNV | gain | 21293372 |
| esv3641612 | CNV | loss | 21293372 |
| esv3893065 | CNV | gain | 25118596 |
| esv4964 | CNV | loss | 18987735 |
| esv7766 | CNV | loss | 19470904 |
| nsv1066089 | CNV | loss | 25217958 |
| nsv1134691 | CNV | deletion | 24896259 |
| nsv1146733 | CNV | deletion | 26484159 |
| nsv131065 | CNV | deletion | 16902084 |
| nsv954941 | CNV | deletion | 24416366 |
| nsv9601 | CNV | gain | 18304495 |
| nsv960246 | CNV | duplication | 23825009 |
| nsv9603 | CNV | loss | 18304495 |
Additional Variant Information for DLGAP1-AS4 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- DLGAP1-AS4
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for DLGAP1-AS4 Gene
Disorders for DLGAP1-AS4 Gene
Additional Disease Information for DLGAP1-AS4
No disorders were found for DLGAP1-AS4 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DLGAP1-AS4 Gene
Publications for DLGAP1-AS4 Gene
No publications were found for DLGAP1-AS4 Gene.
Products for DLGAP1-AS4 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DLGAP1-AS4
- Origene Custom Protein Services for DLGAP1-AS4
- Browse OriGene Inhibitory RNA Products For DLGAP1-AS4
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for DLGAP1-AS4
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For DLGAP1-AS4
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for DLGAP1-AS4
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for DLGAP1-AS4
- Search GeneCopoeia for miRNA 3'UTR Target clone products for DLGAP1-AS4
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for DLGAP1-AS4
Sources for DLGAP1-AS4 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB