Aliases for DLGAP1-AS2 Gene

Subcategory (RNA class) for DLGAP1-AS2 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for DLGAP1-AS2 Gene

  • DLGAP1 Antisense RNA 2 2 3 5
  • DLGAP1-AS2 2 5 165
  • DLGAP1 Antisense RNA 2 (Non-Protein Coding) 2 3
  • NONHSAG023238.2 91
  • HSALNG0119716 164
  • DLPAP1-AS2 3
  • MGC11082 2

External Ids for DLGAP1-AS2 Gene

Summaries for DLGAP1-AS2 Gene

GeneCards Summary for DLGAP1-AS2 Gene

DLGAP1-AS2 (DLGAP1 Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DLGAP1-AS2 include Astrocytoma and Chromosome 18P Deletion Syndrome.

Additional gene information for DLGAP1-AS2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DLGAP1-AS2 Gene

Genomics for DLGAP1-AS2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DLGAP1-AS2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DLGAP1-AS2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DLGAP1-AS2 Gene

Genomic Locations for DLGAP1-AS2 Gene
chr18:3,603,000-3,610,089
(GRCh38/hg38)
Size:
7,090 bases
Orientation:
Plus strand
chr18:3,602,998-3,608,334
(GRCh37/hg19)
Size:
5,337 bases
Orientation:
Plus strand

Genomic View for DLGAP1-AS2 Gene

Genes around DLGAP1-AS2 on UCSC Golden Path with GeneCards custom track
DLGAP1-AS2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
DLGAP1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DLGAP1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DLGAP1-AS2 Gene

Proteins for DLGAP1-AS2 Gene

Post-translational modifications for DLGAP1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLGAP1-AS2 Gene

Domains & Families for DLGAP1-AS2 Gene

Gene Families for DLGAP1-AS2 Gene

genes like me logo Genes that share domains with DLGAP1-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DLGAP1-AS2 Gene

Function for DLGAP1-AS2 Gene

Phenotypes From GWAS Catalog for DLGAP1-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLGAP1-AS2 Gene

Localization for DLGAP1-AS2 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DLGAP1-AS2 gene
Compartment Confidence
extracellular 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DLGAP1-AS2 Gene

Pathways & Interactions for DLGAP1-AS2 Gene

PathCards logo

SuperPathways for DLGAP1-AS2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DLGAP1-AS2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DLGAP1-AS2 Gene

Drugs & Compounds for DLGAP1-AS2 Gene

No Compound Related Data Available

Transcripts for DLGAP1-AS2 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for DLGAP1-AS2 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075EE3F_9606 lncRNA 923 5

HGNC: 28146,

RefSeq: NR_119377,

LncBook: HSALNT0247196,

LNCipedia: DLGAP1-AS2:2,

NONCODE: NONHSAT177363.1,

URS00002146CC_9606 lncRNA 2261 4

Ensembl: ENST00000572856 (view in UCSC) ,

LncBook: HSALNT0247197,

LNCipedia: DLGAP1-AS2:4,

NONCODE: NONHSAT057009.2,

URS00001D649C_9606 lncRNA 1388 3

Ensembl: ENST00000573177 (view in UCSC) ,

LNCipedia: DLGAP1-AS2:1,

NONCODE: NONHSAT057008.2,

URS00008BB203_9606 lncRNA 2125 3

LncBook: HSALNT0247201,

LNCipedia: DLGAP1-AS2:6,

NONCODE: NONHSAT057011.2,

URS00008BFCEF_9606 lncRNA 2239 2

LncBook: HSALNT0247198,

LNCipedia: DLGAP1-AS2:3,

DLGAP1-AS2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for DLGAP1-AS2 Gene

1 REFSEQ mRNAs :
6 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for DLGAP1-AS2 Gene

No ASD Table

Relevant External Links for DLGAP1-AS2 Gene

GeneLoc Exon Structure for
DLGAP1-AS2

Expression for DLGAP1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DLGAP1-AS2 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DLGAP1-AS2

SOURCE GeneReport for Unigene cluster for DLGAP1-AS2 Gene:

Hs.659053
genes like me logo Genes that share expression patterns with DLGAP1-AS2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DLGAP1-AS2 Gene

Orthologs for DLGAP1-AS2 Gene

Evolution for DLGAP1-AS2 Gene

ENSEMBL:
Gene Tree for DLGAP1-AS2 (if available)
TreeFam:
Gene Tree for DLGAP1-AS2 (if available)

No data available for Orthologs for DLGAP1-AS2 Gene

Paralogs for DLGAP1-AS2 Gene

No data available for Paralogs for DLGAP1-AS2 Gene

Variants for DLGAP1-AS2 Gene

Additional dbSNP identifiers (rs#s) for DLGAP1-AS2 Gene

Structural Variations from Database of Genomic Variants (DGV) for DLGAP1-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv184n21 CNV gain 19592680
esv2490559 CNV insertion 19546169

Additional Variant Information for DLGAP1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DLGAP1-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for DLGAP1-AS2 Gene

Disorders for DLGAP1-AS2 Gene

MalaCards: The human disease database

(4) MalaCards diseases for DLGAP1-AS2 Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
astrocytoma
  • astrocytic tumor
chromosome 18p deletion syndrome
  • 18p- syndrome
orofaciodigital syndrome viii
  • cleft lip/palate with abnormal thumbs and microcephaly
facioscapulohumeral muscular dystrophy 2
  • fshd2
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with DLGAP1-AS2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DLGAP1-AS2 Gene

Publications for DLGAP1-AS2 Gene

  1. LncRNA DLGAP1-AS2 modulates glioma development by up-regulating YAP1 expression. (PMID: 31899508) Miao W … Cheng H (Journal of biochemistry 2020) 2 3
  2. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for DLGAP1-AS2 Gene

Sources for DLGAP1-AS2 Gene