DLG5-AS1 Gene (RNA Gene)

DLG5 Antisense RNA 1

GC10P077926
GIFtS:
12
See more...

Aliases for DLG5-AS1 Gene

Subcategory (RNA class) for DLG5-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for DLG5-AS1 Gene

  • DLG5 Antisense RNA 1 2 3 5
  • DLG5-AS1 2 5 165
  • NONHSAG006301.2 91
  • HSALNG0079068 164

External Ids for DLG5-AS1 Gene

Additional External Ids for DLG5-AS1 Gene

Previous GeneCards Identifiers for DLG5-AS1 Gene

  • GC10P080469
  • GC10P080754
  • GC10P081182

Summaries for DLG5-AS1 Gene

GeneCards Summary for DLG5-AS1 Gene

DLG5-AS1 (DLG5 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for DLG5-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DLG5-AS1 Gene

Genomics for DLG5-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for DLG5-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DLG5-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DLG5-AS1 Gene

Genomic Locations for DLG5-AS1 Gene
chr10:77,926,208-77,929,825
(GRCh38/hg38)
Size:
3,618 bases
Orientation:
Plus strand
chr10:79,686,570-79,689,583
(GRCh37/hg19)
Size:
3,014 bases
Orientation:
Plus strand

Genomic View for DLG5-AS1 Gene

Genes around DLG5-AS1 on UCSC Golden Path with GeneCards custom track
DLG5-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
DLG5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DLG5-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for DLG5-AS1 Gene

Proteins for DLG5-AS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for DLG5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLG5-AS1 Gene

Domains & Families for DLG5-AS1 Gene

Gene Families for DLG5-AS1 Gene

HGNC:
genes like me logo Genes that share domains with DLG5-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DLG5-AS1 Gene

Function for DLG5-AS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for DLG5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLG5-AS1 Gene

Localization for DLG5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DLG5-AS1 Gene

Pathways & Interactions for DLG5-AS1 Gene

PathCards logo

SuperPathways for DLG5-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DLG5-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DLG5-AS1 Gene

Drugs & Compounds for DLG5-AS1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for DLG5-AS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for DLG5-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004082BA_9606 lncRNA 487 4

Ensembl: ENST00000449852 (view in UCSC) , ENST00000632893 (view in UCSC) ,

LncBook: HSALNT0164828,

LNCipedia: DLG5-AS1:3,

NONCODE: NONHSAT015044.2,

URS0000759D71_9606 lncRNA 3014 2

HGNC: 45109,

RefSeq: NR_024585,

URS00008B899B_9606 lncRNA 3014 2

LNCipedia: DLG5-AS1:2,

NONCODE: NONHSAT015043.2,

URS00009C43DB_9606 lncRNA 850 2

LncBook: HSALNT0164820,

NONCODE: NONHSAT155730.1,

URS00008B9497_9606 lncRNA 238 2

LncBook: HSALNT0164823,

NONCODE: NONHSAT015042.2,

DLG5-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for DLG5-AS1 Gene

3 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DLG5-AS1 Gene

No ASD Table

Relevant External Links for DLG5-AS1 Gene

GeneLoc Exon Structure for
DLG5-AS1

Expression for DLG5-AS1 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DLG5-AS1 Gene

mRNA expression in normal human tissues for DLG5-AS1 Gene
mRNA expression by GTEx for DLG5-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DLG5-AS1

SOURCE GeneReport for Unigene cluster for DLG5-AS1 Gene:

Hs.547908
genes like me logo Genes that share expression patterns with DLG5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DLG5-AS1 Gene

Orthologs for DLG5-AS1 Gene

Evolution for DLG5-AS1 Gene

ENSEMBL:
Gene Tree for DLG5-AS1 (if available)
TreeFam:
Gene Tree for DLG5-AS1 (if available)

No data available for Orthologs for DLG5-AS1 Gene

Paralogs for DLG5-AS1 Gene

No data available for Paralogs for DLG5-AS1 Gene

Variants for DLG5-AS1 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Additional dbSNP identifiers (rs#s) for DLG5-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for DLG5-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1271n54 CNV gain 21841781
dgv1272n54 CNV gain 21841781
esv27942 CNV loss 19812545
nsv1126261 CNV deletion 24896259
nsv551557 CNV loss 21841781

Additional Variant Information for DLG5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DLG5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for DLG5-AS1 Gene

Disorders for DLG5-AS1 Gene

Additional Disease Information for DLG5-AS1

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for DLG5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DLG5-AS1 Gene

Publications for DLG5-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3

ExternalLinks

View latest publications for DLG5-AS1 gene in Mastermind

Products for DLG5-AS1 Gene

Sources for DLG5-AS1 Gene