DLG5-AS1 Gene (RNA Gene)

DLG5 Antisense RNA 1

GC10P077926
GIFtS:
13

Aliases for DLG5-AS1 Gene

Subcategory (RNA class) for DLG5-AS1 Gene

ncRNA

Quality Score for this RNA gene is

16

Aliases for DLG5-AS1 Gene

  • DLG5 Antisense RNA 1 2 3 5
  • DLG5-AS1 2 170
  • NONHSAG006301 94
  • HSALNG0079068 169

External Ids for DLG5-AS1 Gene

Additional External Ids for DLG5-AS1 Gene

Previous GeneCards Identifiers for DLG5-AS1 Gene

  • GC10P080469
  • GC10P080754
  • GC10P081182

Summaries for DLG5-AS1 Gene

GeneCards Summary for DLG5-AS1 Gene

DLG5-AS1 (DLG5 Antisense RNA 1) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for DLG5-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DLG5-AS1 Gene

Genomics for DLG5-AS1 Gene

GeneHancer (GH) Regulatory Elements for DLG5-AS1 Gene

Promoters and enhancers for DLG5-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DLG5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DLG5-AS1 Gene

Genomic Locations for DLG5-AS1 Gene
chr10:77,926,208-77,929,825
(GRCh38/hg38)
Size:
3,618 bases
Orientation:
Plus strand
chr10:79,686,570-79,689,583
(GRCh37/hg19)
Size:
3,014 bases
Orientation:
Plus strand

Genomic View for DLG5-AS1 Gene

Genes around DLG5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DLG5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DLG5-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for DLG5-AS1 Gene

Proteins for DLG5-AS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for DLG5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLG5-AS1 Gene

Domains & Families for DLG5-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DLG5-AS1 Gene

Function for DLG5-AS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for DLG5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLG5-AS1 Gene

Localization for DLG5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DLG5-AS1 Gene

Pathways & Interactions for DLG5-AS1 Gene

PathCards logo

SuperPathways for DLG5-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DLG5-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DLG5-AS1 Gene

Drugs & Compounds for DLG5-AS1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for DLG5-AS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for DLG5-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(6) RNACentral transcripts :
(3) LncBook transcripts :
(4) NONCODE transcripts :
(3) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for DLG5-AS1 Gene

No ASD Table

Relevant External Links for DLG5-AS1 Gene

GeneLoc Exon Structure for
DLG5-AS1
ECgene alternative splicing isoforms for
DLG5-AS1

Expression for DLG5-AS1 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DLG5-AS1 Gene

mRNA expression in normal human tissues for DLG5-AS1 Gene
mRNA expression by GTEx for DLG5-AS1 Gene

SOURCE GeneReport for Unigene cluster for DLG5-AS1 Gene:

Hs.547908
genes like me logo Genes that share expression patterns with DLG5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DLG5-AS1 Gene

Orthologs for DLG5-AS1 Gene

Evolution for DLG5-AS1 Gene

ENSEMBL:
Gene Tree for DLG5-AS1 (if available)
TreeFam:
Gene Tree for DLG5-AS1 (if available)

No data available for Orthologs for DLG5-AS1 Gene

Paralogs for DLG5-AS1 Gene

No data available for Paralogs for DLG5-AS1 Gene

Variants for DLG5-AS1 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Sequence variations from dbSNP and Humsavar for DLG5-AS1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000684385 -- 77,925,065(+) T/ upstream_transcript_variant
rs1000976541 -- 77,930,190(+) C/T downstream_transcript_variant
rs1001858144 -- 77,925,449(+) G/C upstream_transcript_variant
rs1002310652 -- 77,925,793(+) C/T upstream_transcript_variant
rs1002530497 -- 77,927,959(+) T/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DLG5-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1271n54 CNV gain 21841781
dgv1272n54 CNV gain 21841781
esv27942 CNV loss 19812545
nsv1126261 CNV deletion 24896259
nsv551557 CNV loss 21841781

Additional Variant Information for DLG5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DLG5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DLG5-AS1 Gene

Disorders for DLG5-AS1 Gene

Additional Disease Information for DLG5-AS1

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for DLG5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DLG5-AS1 Gene

Publications for DLG5-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 56

ExternalLinks

View latest publications for DLG5-AS1 gene in Mastermind

Products for DLG5-AS1 Gene

Sources for DLG5-AS1 Gene