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Aliases for DKFZp779M0652 Gene

Subcategory (RNA class) for DKFZp779M0652 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for DKFZp779M0652 Gene

  • Uncharacterized DKFZp779M0652 3
  • AC044839.1 5

External Ids for DKFZp779M0652 Gene

Previous GeneCards Identifiers for DKFZp779M0652 Gene

  • GC11P045757
  • GC11P045658
  • GC11U900947
  • GC11P045794
  • GC11P045802
  • GC11P045812
  • GC11P045772
  • GC11P045787
  • GC11P045817
  • GC11P045829
  • GC11P045844
  • GC11P045851
  • GC11P045874

Summaries for DKFZp779M0652 Gene

GeneCards Summary for DKFZp779M0652 Gene

DKFZp779M0652 (Uncharacterized DKFZp779M0652) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for DKFZp779M0652 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZp779M0652 Gene

Genomics for DKFZp779M0652 Gene

GeneHancer (GH) Regulatory Elements for DKFZp779M0652 Gene

Promoters and enhancers for DKFZp779M0652 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J045771 Promoter/Enhancer 1.4 Ensembl ENCODE 668.8 +0.5 453 1.6 HDGF PKNOX1 CLOCK SIN3A ZNF2 IRF4 BRCA1 ZNF48 YY1 ZNF121 DKFZp779M0652 SLC35C1 CHST1 GC11P045681
GH11J045803 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10 +33.8 33778 3 HDGF PKNOX1 ZFP64 ARID4B SIN3A YBX1 DMAP1 ZBTB7B YY1 POLR2B SLC35C1 AMBRA1 DKFZp779M0652 ENSG00000255447
GH11J045854 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.5 +86.7 86670 6.2 MXI1 CLOCK USF1 KLF17 MAX SIN3A ZIC2 RAD21 YY1 ZFHX2 MAPK8IP1 C11orf94 ENSG00000255498 PEX16 LARGE2 DKFZp779M0652 SLC35C1 CRY2
GH11J045754 Enhancer 0.5 ENCODE 15.8 -16.2 -16172 2.1 MEIS2 ZFHX2 GATA3 IKZF1 ZFP36 ZMYM3 EGR2 GC11P045888 DKFZp779M0652 SLC35C1 LOC105376658 GC11P045681
GH11J045879 Enhancer 1.1 ENCODE dbSUPER 6.4 +109.7 109702 3.1 ATF1 PKNOX1 TCF12 FOS ATF7 NCOA1 REST TSHZ1 ATF4 GMEB1 C11orf94 ENSG00000255498 LARGE2 PEX16 MAPK8IP1 DKFZp779M0652 CRY2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DKFZp779M0652 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the DKFZp779M0652 gene promoter:
  • FAC1
  • c-Ets-1
  • AML1a
  • GATA-1
  • RP58
  • Tal-1
  • E47
  • LyF-1
  • PPAR-alpha
  • POU3F2

Genomic Locations for DKFZp779M0652 Gene

Genomic Locations for DKFZp779M0652 Gene
chr11:45,771,432-45,772,358
(GRCh38/hg38)
Size:
927 bases
Orientation:
Plus strand
chr11:45,792,983-45,793,909
(GRCh37/hg19)
Size:
927 bases
Orientation:
Plus strand

Genomic View for DKFZp779M0652 Gene

Genes around DKFZp779M0652 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DKFZp779M0652 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DKFZp779M0652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZp779M0652 Gene

Proteins for DKFZp779M0652 Gene

  • Protein details for DKFZp779M0652 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q6N098-Q6N098_HUMAN
    Recommended name:
    Uncharacterized protein DKFZp779M0652
    Protein Accession:
    Q6N098

    Protein attributes for DKFZp779M0652 Gene

    Size:
    120 amino acids
    Molecular mass:
    13055 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DKFZp779M0652 Gene

Post-translational modifications for DKFZp779M0652 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZp779M0652 Gene

Domains & Families for DKFZp779M0652 Gene

Protein Domains for DKFZp779M0652 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DKFZp779M0652: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZp779M0652 Gene

Function for DKFZp779M0652 Gene

Phenotypes From GWAS Catalog for DKFZp779M0652 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DKFZp779M0652 Gene

Localization for DKFZp779M0652 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DKFZp779M0652 Gene

Pathways & Interactions for DKFZp779M0652 Gene

SuperPathways for DKFZp779M0652 Gene

No Data Available

Interacting Proteins for DKFZp779M0652 Gene

Gene Ontology (GO) - Biological Process for DKFZp779M0652 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DKFZp779M0652 Gene

Drugs & Compounds for DKFZp779M0652 Gene

No Compound Related Data Available

Transcripts for DKFZp779M0652 Gene

mRNA/cDNA for DKFZp779M0652 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(19) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(10) RNA Central transcripts :

Unigene Clusters for DKFZp779M0652 Gene

Uncharacterized DKFZp779M0652:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZp779M0652 Gene

No ASD Table

Relevant External Links for DKFZp779M0652 Gene

GeneLoc Exon Structure for
DKFZp779M0652

Expression for DKFZp779M0652 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DKFZp779M0652 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZp779M0652 Gene

This gene is overexpressed in Muscle - Skeletal (x4.9).

SOURCE GeneReport for Unigene cluster for DKFZp779M0652 Gene:

Hs.632142
genes like me logo Genes that share expression patterns with DKFZp779M0652: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DKFZp779M0652 Gene

Orthologs for DKFZp779M0652 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for DKFZp779M0652 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 34
  • 96 (a)
OneToOne
Species where no ortholog for DKFZp779M0652 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for DKFZp779M0652 Gene

ENSEMBL:
Gene Tree for DKFZp779M0652 (if available)
TreeFam:
Gene Tree for DKFZp779M0652 (if available)

Paralogs for DKFZp779M0652 Gene

No data available for Paralogs for DKFZp779M0652 Gene

Variants for DKFZp779M0652 Gene

Sequence variations from dbSNP and Humsavar for DKFZp779M0652 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000412973 -- 45,771,840(+) C/A intron_variant
rs1001650218 -- 45,771,062(+) A/G upstream_transcript_variant
rs1002557871 -- 45,769,909(+) C/T upstream_transcript_variant
rs1004219250 -- 45,771,319(+) A/G upstream_transcript_variant
rs1004556128 -- 45,772,672(+) C/A/T downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DKFZp779M0652 Gene

Variant ID Type Subtype PubMed ID
esv3891976 CNV loss 25118596

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for DKFZp779M0652 Gene

Disorders for DKFZp779M0652 Gene

Additional Disease Information for DKFZp779M0652

No disorders were found for DKFZp779M0652 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DKFZp779M0652 Gene

Publications for DKFZp779M0652 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DKFZp779M0652 Gene

Sources for DKFZp779M0652 Gene

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