Aliases for DKFZP434H168 Gene

Subcategory (RNA class) for DKFZP434H168 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for DKFZP434H168 Gene

  • Uncharacterized LOC26077 3
  • CTD-2050B12.2 3
  • NONHSAG019519 92
  • Lnc-AMFR-2 168

External Ids for DKFZP434H168 Gene

Previous GeneCards Identifiers for DKFZP434H168 Gene

  • GC16U990096
  • GC16M056226

Summaries for DKFZP434H168 Gene

GeneCards Summary for DKFZP434H168 Gene

DKFZP434H168 (Uncharacterized LOC26077) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for DKFZP434H168 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DKFZP434H168 Gene

Genomics for DKFZP434H168 Gene

GeneHancer (GH) Regulatory Elements for DKFZP434H168 Gene

Promoters and enhancers for DKFZP434H168 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J056190 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +2.0 2024 5.4 EP300 NRF1 ZIC2 REST ZBTB26 SAP30 TGIF2 CTBP1 MXI1 ZNF341 GNAO1 ENSG00000246379 LOC283856 NONHSAG019518.2 RSPRY1 DKFZP434H168 ENSG00000261439
GH16J056200 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -5.7 -5676 6.8 CTCF USF1 EP300 REST RAD21 NFYB RBM25 BCL11A SMC3 USF2 GNAO1 ENSG00000246379 DKFZP434H168 HSALNG0111669
GH16J056212 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -17.5 -17475 1.6 NR2F2 JUND RXRA MAX HNF4A REST HLF SP1 YY1 SCRT2 GNAO1 ENSG00000246379 DKFZP434H168 HSALNG0111669
GH16J056224 Enhancer 0.8 Ensembl dbSUPER 0.3 -31.9 -31876 3.2 FOXA2 NR2F2 ZBTB33 JUND RAD21 RXRA MAX HNF4A PRDM4 REST GNAO1 ENSG00000246379 HSALNG0111669 DKFZP434H168
GH16J056233 Enhancer 0.7 Ensembl dbSUPER 0.3 -39.9 -39876 0.4 SPI1 NR2F2 JUND SMAD4 RXRA HNF4A MAX HNF4G ATF3 SP1 HSALNG0111669 DKFZP434H168 GNAO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DKFZP434H168 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the DKFZP434H168 gene promoter:
  • Brachyury
  • E47
  • Hand1
  • HNF-3beta
  • HOXA5
  • NF-kappaB1
  • SREBP-1a
  • SREBP-1b
  • SREBP-1c

Genomic Locations for DKFZP434H168 Gene

Genomic Locations for DKFZP434H168 Gene
chr16:56,192,617-56,194,525
(GRCh38/hg38)
Size:
1,909 bases
Orientation:
Minus strand
chr16:56,226,526-56,228,437
(GRCh37/hg19)
Size:
1,912 bases
Orientation:
Minus strand

Genomic View for DKFZP434H168 Gene

Genes around DKFZP434H168 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DKFZP434H168 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DKFZP434H168 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZP434H168 Gene

Proteins for DKFZP434H168 Gene

Post-translational modifications for DKFZP434H168 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZP434H168 Gene

Domains & Families for DKFZP434H168 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DKFZP434H168 Gene

Function for DKFZP434H168 Gene

Phenotypes From GWAS Catalog for DKFZP434H168 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DKFZP434H168 Gene

Localization for DKFZP434H168 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DKFZP434H168 Gene

Pathways & Interactions for DKFZP434H168 Gene

PathCards logo

SuperPathways for DKFZP434H168 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for DKFZP434H168 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DKFZP434H168 Gene

Drugs & Compounds for DKFZP434H168 Gene

No Compound Related Data Available

Transcripts for DKFZP434H168 Gene

mRNA/cDNA for DKFZP434H168 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZP434H168 Gene

No ASD Table

Relevant External Links for DKFZP434H168 Gene

GeneLoc Exon Structure for
DKFZP434H168

Expression for DKFZP434H168 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DKFZP434H168 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZP434H168 Gene

This gene is overexpressed in Testis (x25.5).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DKFZP434H168

SOURCE GeneReport for Unigene cluster for DKFZP434H168 Gene:

Hs.721567
genes like me logo Genes that share expression patterns with DKFZP434H168: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DKFZP434H168 Gene

Orthologs for DKFZP434H168 Gene

No data available for Orthologs and Evolution for DKFZP434H168 Gene

Paralogs for DKFZP434H168 Gene

No data available for Paralogs for DKFZP434H168 Gene

Variants for DKFZP434H168 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for DKFZP434H168 Gene

SNP ID Clinical significance and condition Chr 16 pos Variation AA Info Type
rs145872570 Likely Benign: not provided. Benign: not provided 56,192,624(-) C/GC/T NON_CODING_TRANSCRIPT_VARIANT,INTRON_VARIANT

Additional dbSNP identifiers (rs#s) for DKFZP434H168 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for DKFZP434H168 Gene

Disorders for DKFZP434H168 Gene

No disorders were found for DKFZP434H168 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DKFZP434H168 Gene

Publications for DKFZP434H168 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for DKFZP434H168 Gene

Products for DKFZP434H168 Gene

Sources for DKFZP434H168 Gene