Aliases for DIRC3-AS1 Gene

Data sources for DIRC3-AS1 Gene:

RNA type for DIRC3-AS1 Gene

lncRNA

Aliases for DIRC3-AS1 Gene

External Ids for DIRC3-AS1 Gene

Previous GeneCards Identifiers for DIRC3-AS1 Gene

  • GC02P217282
  • GC02P217259

Summaries for DIRC3-AS1 Gene

GeneCards Summary for DIRC3-AS1 Gene

DIRC3-AS1 (DIRC3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for DIRC3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DIRC3-AS1 Gene

Genomics for DIRC3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DIRC3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DIRC3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DIRC3-AS1 Gene

Latest Assembly
chr2:217,223,465-217,344,204
(GRCh38/hg38)
Size:
120,740 bases
Orientation:
Plus strand

Previous Assembly
chr2:218,147,456-218,208,927
(GRCh37/hg19 by Entrez Gene)
Size:
61,472 bases
Orientation:
Plus strand

chr2:218,147,462-218,200,843
(GRCh37/hg19 by Ensembl)
Size:
53,382 bases
Orientation:
Plus strand

Genomic View for DIRC3-AS1 Gene

Genes around DIRC3-AS1 on UCSC Golden Path with GeneCards custom track
DIRC3-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
DIRC3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DIRC3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DIRC3-AS1 Gene

Proteins for DIRC3-AS1 Gene

Post-translational modifications for DIRC3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DIRC3-AS1 Gene

Domains & Families for DIRC3-AS1 Gene

Gene Families for DIRC3-AS1 Gene

genes like me logo Genes that share domains with DIRC3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DIRC3-AS1 Gene

Function for DIRC3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DIRC3-AS1 Gene

Localization for DIRC3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DIRC3-AS1 Gene

Pathways & Interactions for DIRC3-AS1 Gene

PathCards logo

SuperPathways for DIRC3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DIRC3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DIRC3-AS1 Gene

Drugs & Compounds for DIRC3-AS1 Gene

No Compound Related Data Available

Transcripts for DIRC3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for DIRC3-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000394FBC_9606 lncRNA 562 4

Ensembl: ENST00000452813 (view in UCSC) ,

LncBook: HSALNT0047174,

LNCipedia: DIRC3-AS1:3,

NONCODE: NONHSAT076859.2,

URS00008E39DA_9606 lncRNA 1059 2

RefSeq: NR_133642,

LNCipedia: DIRC3-AS1:18,

URS0000EF1629_9606 lncRNA 5257 1

Ensembl: ENST00000666326 (view in UCSC) ,

URS0000EF38C5_9606 lncRNA 4443 1

Ensembl: ENST00000657920 (view in UCSC) ,

URS0000EF08F3_9606 lncRNA 3091 1

Ensembl: ENST00000655995 (view in UCSC) ,

DIRC3-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for DIRC3-AS1 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for DIRC3-AS1 Gene

No ASD Table

Relevant External Links for DIRC3-AS1 Gene

GeneLoc Exon Structure for
DIRC3-AS1

Expression for DIRC3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DIRC3-AS1 Gene

genes like me logo Genes that share expression patterns with DIRC3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DIRC3-AS1 Gene

Orthologs for DIRC3-AS1 Gene

Evolution for DIRC3-AS1 Gene

ENSEMBL:
Gene Tree for DIRC3-AS1 (if available)
TreeFam:
Gene Tree for DIRC3-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for DIRC3-AS1

No data available for Orthologs for DIRC3-AS1 Gene

Paralogs for DIRC3-AS1 Gene

No data available for Paralogs for DIRC3-AS1 Gene

Variants for DIRC3-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for DIRC3-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for DIRC3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DIRC3-AS1
Leiden Open Variation Database (LOVD)
DIRC3-AS1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DIRC3-AS1 Gene

Disorders for DIRC3-AS1 Gene

Additional Disease Information for DIRC3-AS1

No disorders were found for DIRC3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DIRC3-AS1 Gene

Publications for DIRC3-AS1 Gene

No publications were found for DIRC3-AS1 Gene.

Products for DIRC3-AS1 Gene

Sources for DIRC3-AS1 Gene