Aliases for DICER1-AS1 Gene

Data sources for DICER1-AS1 Gene:

Subcategory (RNA class) for DICER1-AS1 Gene

lncRNA

Aliases for DICER1-AS1 Gene

External Ids for DICER1-AS1 Gene

Previous HGNC Symbols for DICER1-AS1 Gene

  • DICER1-AS

Previous GeneCards Identifiers for DICER1-AS1 Gene

  • GC14P095623

Summaries for DICER1-AS1 Gene

GeneCards Summary for DICER1-AS1 Gene

DICER1-AS1 (DICER1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for DICER1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DICER1-AS1 Gene

Genomics for DICER1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DICER1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J095155 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -0.5 -537 3.8 ZSCAN16 CHD2 ZBTB10 SP1 FEZF1 NR2C1 MNT SMAD5 MBD2 ZNF217 DICER1 DICER1-AS1 lnc-DICER1-2 SCARNA13 SNHG10 MIR3173 GSC
GH14J095128 Enhancer 0.3 Ensembl 12.1 -30.1 -30138 0.2 YY1 DICER1 DICER1-AS1 CLMN MIR3173 HSALNG0103420 GSC
GH14J095143 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.5 -13478 1.3 IRF2 IKZF1 SPI1 IKZF2 RELB MLLT1 DICER1 CLMN MIR3173 DICER1-AS1 lnc-DICER1-2 GSC
GH14J095174 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +15.7 15663 3.4 CTCF MAFF ZNF316 SPI1 POLR2A MAFK MAFG RAD21 JUNB IKZF1 CLMN piR-52008-006 HSALNG0103423 DICER1 DICER1-AS1
GH14J095146 Enhancer 0.8 FANTOM5 ENCODE dbSUPER 0.4 -10.8 -10832 0.5 ZNF680 ZBTB33 PRDM1 ZNF600 CLMN MIR3173 DICER1 DICER1-AS1 lnc-DICER1-2 GSC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DICER1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DICER1-AS1 Gene

Latest Assembly
chr14:95,157,438-95,181,475
(GRCh38/hg38)
Size:
24,038 bases
Orientation:
Plus strand

Previous Assembly
chr14:95,624,025-95,646,270
(GRCh37/hg19 by Entrez Gene)
Size:
22,246 bases
Orientation:
Plus strand

chr14:95,623,982-95,646,263
(GRCh37/hg19 by Ensembl)
Size:
22,282 bases
Orientation:
Plus strand

Genomic View for DICER1-AS1 Gene

Genes around DICER1-AS1 on UCSC Golden Path with GeneCards custom track
DICER1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
DICER1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DICER1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DICER1-AS1 Gene

Proteins for DICER1-AS1 Gene

Post-translational modifications for DICER1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DICER1-AS1 Gene

Domains & Families for DICER1-AS1 Gene

Gene Families for DICER1-AS1 Gene

genes like me logo Genes that share domains with DICER1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DICER1-AS1 Gene

Function for DICER1-AS1 Gene

Phenotypes From GWAS Catalog for DICER1-AS1 Gene

Phenotypes for DICER1-AS1 Gene

GenomeRNAi human phenotypes for DICER1-AS1:
genes like me logo Genes that share phenotypes with DICER1-AS1: view

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DICER1-AS1 Gene

Localization for DICER1-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DICER1-AS1 gene
Compartment Confidence
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DICER1-AS1 Gene

Pathways & Interactions for DICER1-AS1 Gene

PathCards logo

SuperPathways for DICER1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DICER1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DICER1-AS1 Gene

Drugs & Compounds for DICER1-AS1 Gene

No Compound Related Data Available

Transcripts for DICER1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for DICER1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000005BF73_9606 lncRNA 2325 3

Ensembl: ENST00000439999 (view in UCSC) ,

LNCipedia: DICER1-AS1:16,

NONCODE: NONHSAT039428.2,

URS000078350F_9606 lncRNA 1709 3

Ensembl: ENST00000554631 (view in UCSC) ,

LncBook: HSALNT0215130,

LNCipedia: DICER1-AS1:3,

URS0000423ACC_9606 lncRNA 810 3

Ensembl: ENST00000439819 (view in UCSC) ,

LNCipedia: DICER1-AS1:4,

NONCODE: NONHSAT039418.2,

URS00000CD2BB_9606 lncRNA 723 3

Ensembl: ENST00000435343 (view in UCSC) ,

LncBook: HSALNT0215151,

LNCipedia: DICER1-AS1:12,

URS0000EEFE37_9606 lncRNA 3358 1

Ensembl: ENST00000671073 (view in UCSC) ,

DICER1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for DICER1-AS1 Gene

1 REFSEQ mRNAs :
6 NCBI additional mRNA sequence :

CRISPR products for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for DICER1-AS1

Alternative Splicing Database (ASD) splice patterns (SP) for DICER1-AS1 Gene

No ASD Table

Relevant External Links for DICER1-AS1 Gene

GeneLoc Exon Structure for
DICER1-AS1

Expression for DICER1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DICER1-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DICER1-AS1

SOURCE GeneReport for Unigene cluster for DICER1-AS1 Gene:

Hs.497573
genes like me logo Genes that share expression patterns with DICER1-AS1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DICER1-AS1 Gene

Orthologs for DICER1-AS1 Gene

Evolution for DICER1-AS1 Gene

ENSEMBL:
Gene Tree for DICER1-AS1 (if available)
TreeFam:
Gene Tree for DICER1-AS1 (if available)

No data available for Orthologs for DICER1-AS1 Gene

Paralogs for DICER1-AS1 Gene

No data available for Paralogs for DICER1-AS1 Gene

Variants for DICER1-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for DICER1-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for DICER1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3635396 CNV gain 21293372
nsv1036738 CNV gain 25217958

Additional Variant Information for DICER1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DICER1-AS1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for DICER1-AS1 Gene

Disorders for DICER1-AS1 Gene

Additional Disease Information for DICER1-AS1

No disorders were found for DICER1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DICER1-AS1 Gene

Publications for DICER1-AS1 Gene

  1. LncRNA DICER1-AS1 promotes the proliferation, invasion and autophagy of osteosarcoma cells via miR-30b/ATG5. (PMID: 29772430) Gu Z … Zhang C (Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2018) 2 3
  2. High levels of long non-coding RNA DICER1-AS1 are associated with poor clinical prognosis in patients with osteosarcoma. (PMID: 30536305) Hu XH … Hao YD (European review for medical and pharmacological sciences 2018) 3
  3. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K … Gorospe M (The EMBO journal 2009) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for DICER1-AS1 Gene

Sources for DICER1-AS1 Gene