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Aliases for DICER1-AS1 Gene

Subcategory (RNA class) for DICER1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for DICER1-AS1 Gene

  • DICER1 Antisense RNA 1 2 3 5
  • DICER1 Antisense RNA (Non-Protein Coding) 2 2 3
  • DICER1 Antisense RNA 1 (Non-Protein Coding) 3
  • DICER1-AS 3

External Ids for DICER1-AS1 Gene

Previous HGNC Symbols for DICER1-AS1 Gene

  • DICER1-AS

Previous GeneCards Identifiers for DICER1-AS1 Gene

  • GC14P095623

Summaries for DICER1-AS1 Gene

GeneCards Summary for DICER1-AS1 Gene

DICER1-AS1 (DICER1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DICER1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DICER1-AS1 Gene

Genomics for DICER1-AS1 Gene

GeneHancer (GH) Regulatory Elements for DICER1-AS1 Gene

Promoters and enhancers for DICER1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J095155 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.5 -538 3.2 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 ZNF213 DICER1 DICER1-AS1 ENSG00000258866 MIR3173
GH14J095143 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.6 -13578 1.5 IRF2 ZNF610 IKZF1 MZF1 MLLT1 IKZF2 SPI1 DICER1 CLMN MIR3173 DICER1-AS1
GH14J095146 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -11.0 -11044 0.8 ZNF680 ZBTB33 ZNF600 PRDM1 CLMN MIR3173 DICER1 DICER1-AS1
GH14J095140 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -16.8 -16762 1.4 ZNF692 PRDM10 SPI1 CLMN MIR3173 DICER1 DICER1-AS1
GH14J095164 Enhancer 0.7 FANTOM5 dbSUPER 0.4 +5.6 5648 0.3 SP1 RXRA HNF4A CLMN DICER1 DICER1-AS1 ENSG00000259143
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DICER1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DICER1-AS1 Gene

Genomic Locations for DICER1-AS1 Gene
chr14:95,157,645-95,179,933
(GRCh38/hg38)
Size:
22,289 bases
Orientation:
Plus strand
chr14:95,623,982-95,646,270
(GRCh37/hg19)
Size:
22,289 bases
Orientation:
Plus strand

Genomic View for DICER1-AS1 Gene

Genes around DICER1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DICER1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DICER1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DICER1-AS1 Gene

Proteins for DICER1-AS1 Gene

Post-translational modifications for DICER1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DICER1-AS1 Gene

Domains & Families for DICER1-AS1 Gene

Gene Families for DICER1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DICER1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DICER1-AS1 Gene

Function for DICER1-AS1 Gene

Phenotypes for DICER1-AS1 Gene

GenomeRNAi human phenotypes for DICER1-AS1:
genes like me logo Genes that share phenotypes with DICER1-AS1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for DICER1-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DICER1-AS1 Gene

Localization for DICER1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DICER1-AS1 Gene

Pathways & Interactions for DICER1-AS1 Gene

SuperPathways for DICER1-AS1 Gene

No Data Available

Interacting Proteins for DICER1-AS1 Gene

Gene Ontology (GO) - Biological Process for DICER1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DICER1-AS1 Gene

Drugs & Compounds for DICER1-AS1 Gene

No Compound Related Data Available

Transcripts for DICER1-AS1 Gene

mRNA/cDNA for DICER1-AS1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(25) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(5) RNA Central transcripts :

Unigene Clusters for DICER1-AS1 Gene

DICER1 antisense RNA 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for DICER1-AS1

Alternative Splicing Database (ASD) splice patterns (SP) for DICER1-AS1 Gene

No ASD Table

Relevant External Links for DICER1-AS1 Gene

GeneLoc Exon Structure for
DICER1-AS1
ECgene alternative splicing isoforms for
DICER1-AS1

Expression for DICER1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DICER1-AS1 Gene

SOURCE GeneReport for Unigene cluster for DICER1-AS1 Gene:

Hs.497573
genes like me logo Genes that share expression patterns with DICER1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DICER1-AS1 Gene

Orthologs for DICER1-AS1 Gene

Evolution for DICER1-AS1 Gene

ENSEMBL:
Gene Tree for DICER1-AS1 (if available)
TreeFam:
Gene Tree for DICER1-AS1 (if available)

No data available for Orthologs for DICER1-AS1 Gene

Paralogs for DICER1-AS1 Gene

No data available for Paralogs for DICER1-AS1 Gene

Variants for DICER1-AS1 Gene

Sequence variations from dbSNP and Humsavar for DICER1-AS1 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs148499550 benign, Pleuropulmonary blastoma 95,157,257(+) G/A upstream_transcript_variant
rs547495405 likely-benign, Pleuropulmonary blastoma 95,157,348(+) G/A upstream_transcript_variant
rs886050945 uncertain-significance, Pleuropulmonary blastoma 95,157,328(+) C/G upstream_transcript_variant
rs886050946 uncertain-significance, Pleuropulmonary blastoma 95,157,340(+) T/G upstream_transcript_variant
rs886050947 uncertain-significance, Pleuropulmonary blastoma 95,157,376(+) G/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DICER1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3635396 CNV gain 21293372
nsv1036738 CNV gain 25217958

Additional Variant Information for DICER1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DICER1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DICER1-AS1 Gene

Disorders for DICER1-AS1 Gene

Additional Disease Information for DICER1-AS1

No disorders were found for DICER1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DICER1-AS1 Gene

Publications for DICER1-AS1 Gene

  1. LncRNA DICER1-AS1 promotes the proliferation, invasion and autophagy of osteosarcoma cells via miR-30b/ATG5. (PMID: 29772430) Gu Z … Zhang C (Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2018) 2 3 58
  2. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K … Gorospe M (The EMBO journal 2009) 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DICER1-AS1 Gene

Sources for DICER1-AS1 Gene

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