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Aliases for DGCR5 Gene
Subcategory (RNA class) for DGCR5 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for DGCR5 Gene
- DiGeorge Syndrome Critical Region Gene 5 2 3 5
- DiGeorge Syndrome Critical Region Gene 10 (Non-Protein Coding) 2 3
- DiGeorge Syndrome Critical Region Gene 5 (Non-Protein Coding) 2 3
- DiGeorge Syndrome Critical Region Gene 9 (Non-Protein Coding) 2 3
- Long Intergenic Non-Protein Coding RNA 37 2 3
- NCRNA00037 2 3
- LINC00037 2 3
- POM121L5P 2 3
- DGCR10 2 3
- DGCR9 2 3
- DGS-A 2 3
- DGS-B 2 3
- DGCR5 2 5
- Cadherin EGF LAG Seven-Pass G-Type Receptor 1 Pseudogene 3
- DiGeorge Syndrome Critical Region Gene 10 2
- DiGeorge Syndrome Critical Region Gene 9 2
- Non-Protein Coding RNA 37 2
- DiGeorge Syndrome Gene A 3
- DiGeorge Syndrome Gene B 3
- NONHSAG033246.2 91
- HSALNG0133982 164
- HSALNG0133987 164
- Lnc-DGCR6-6 165
- X91348 2
External Ids for DGCR5 Gene
- HGNC: 16757
- Entrez Gene: 26220
- Ensembl: ENSG00000237517
- OMIM: 618040
Previous HGNC Symbols for DGCR5 Gene
- DGCR9
- DGCR10
Previous GeneCards Identifiers for DGCR5 Gene
- GC22U990094
- GC22P015899
- GC22P017332
- GC22P017347
- GC22P018958
- GC22P002579
- GC22P019258
- GC22P019274
- GC22P019272
- GC22P019451
- GC22P018971
- GC22P018973
- GC22P018983
- GC22P018995
- GC22P019253
Summaries for DGCR5 Gene
GeneCards Summary for DGCR5 Gene
DGCR5 (DiGeorge Syndrome Critical Region Gene 5) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DGCR5 include Digeorge Syndrome and Velocardiofacial Syndrome.
Additional gene information for DGCR5 Gene
- Monarch Initiative
- Search for DGCR5 at DataMed
- Search for DGCR5 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DGCR5 Gene
Genomics for DGCR5 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for DGCR5 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around DGCR5 on the GeneHancer Hub at the UCSC Golden Path
- Top Transcription factor binding sites by QIAGEN in the DGCR5 gene promoter:
-
- AML1a
- CREB
- deltaCREB
- Egr-1
- Egr-4
- HNF-4alpha1
- p53
- Pax-5
Genomic Locations for DGCR5 Gene
Genomic Locations for DGCR5 Gene
- chr22:18,969,860-19,031,242
- (GRCh38/hg38)
- Size:
- 61,383 bases
- Orientation:
- Plus strand
- chr22:18,958,027-19,018,755
- (GRCh37/hg19)
- Size:
- 60,729 bases
- Orientation:
- Plus strand
Genomic View for DGCR5 Gene
Genes around DGCR5 on UCSC Golden Path with GeneCards custom track
DGCR5 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 22q11.21 by HGNC
- 22q11.21 by Entrez Gene
- 22q11.21 by Ensembl
DGCR5 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for DGCR5 Gene
Proteins for DGCR5 Gene
Post-translational modifications for DGCR5 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DGCR5
- Origene Custom Protein Services for DGCR5
No data available for DME Specific Peptides for DGCR5 Gene
Domains & Families for DGCR5 Gene
Gene Families for DGCR5 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DGCR5 Gene
Function for DGCR5 Gene
Phenotypes From GWAS Catalog for DGCR5 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for DGCR5 - Select products 50% OFF >
- * DGCR5 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for DGCR5
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for DGCR5
- Browse OriGene Inhibitory RNA Products For DGCR5
Clone Products
- Applied Biological Materials (abm): Clones for DGCR5 - Select products 50% OFF >
- * DGCR5 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DGCR5 Gene
Localization for DGCR5 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DGCR5 Gene
Transcripts for DGCR5 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for DGCR5 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000BC43E4_9606 | lncRNA | 3323 | 2 |
HGNC: 16757, RefSeq: NR_002733, |
| URS0000759BEC_9606 | lncRNA | 2415 | 2 |
HGNC: 17227, RefSeq: NR_024159, |
| URS00009BFB8D_9606 | lncRNA | 1326 | 2 |
RefSeq: NR_110533, NONCODE: NONHSAT191992.1, |
| URS000075DFDD_9606 | lncRNA | 927 | 2 |
HGNC: 17864, RefSeq: NR_026651, |
| URS0000BC43F2_9606 | lncRNA | 3179 | 1 |
RefSeq: NR_045121, |
DGCR5 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for DGCR5 Gene
- 12 NCBI additional mRNA sequence :
- 3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000438934 5492 nts (view in UCSC)
- ENST00000421572 568 nts (view in UCSC)
- ENST00000399539 862 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for DGCR5 - Select products 50% OFF >
- * DGCR5 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for DGCR5
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for DGCR5
- Browse OriGene Inhibitory RNA Products For DGCR5
Clone Products
- Applied Biological Materials (abm): Clones for DGCR5 - Select products 50% OFF >
- * DGCR5 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for DGCR5 Gene
- GeneLoc Exon Structure for
- DGCR5
Expression for DGCR5 Gene
mRNA differential expression in normal tissues according to GTEx for DGCR5 Gene
This gene is overexpressed in Brain - Cerebellar Hemisphere (x6.4), Brain - Cerebellum (x6.3), Brain - Cortex (x5.6), Brain - Frontal Cortex (BA9) (x4.7), and Brain - Anterior cingulate cortex (BA24) (x4.5).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DGCR5
SOURCE GeneReport for Unigene cluster for DGCR5 Gene:
Hs.646438Primer Products
-
OriGene qPCR primer pairs for DGCR5
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DGCR5 Gene
Orthologs for DGCR5 Gene
No data available for Orthologs for DGCR5 Gene
Paralogs for DGCR5 Gene
No data available for Paralogs for DGCR5 Gene
Variants for DGCR5 Gene
Additional Variant Information for DGCR5 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for DGCR5 Gene
Disorders for DGCR5 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| digeorge syndrome |
|
|
| velocardiofacial syndrome |
|
|
| huntington disease |
|
|
| clear cell renal cell carcinoma |
|
|
| glioma susceptibility 1 |
|
Search DGCR5 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for DGCR5
No data available for UniProtKB/Swiss-Prot and Genatlas for DGCR5 Gene
Publications for DGCR5 Gene
- LncRNA DGCR5 promotes lung adenocarcinoma (LUAD) progression via inhibiting hsa-mir-22-3p. (PMID: 29030962) Dong HX … Pan J (Journal of cellular physiology 2018) 2 3
- Down-Regulation of LncRNA DGCR5 Correlates with Poor Prognosis in Hepatocellular Carcinoma. (PMID: 27898409) Huang R … Sun B (Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology 2016) 2 3
- Human metabolic individuality in biomedical and pharmaceutical research. (PMID: 21886157) Suhre K … Gieger C (Nature 2011) 3 41
- Identification of a novel transcript disrupted by a balanced translocation associated with DiGeorge syndrome. (PMID: 8659529) Sutherland HF … Scambler PJ (American journal of human genetics 1996) 2 3
- Upregulation of lncRNA DGCR5 correlates with better prognosis and inhibits bladder cancer progression via transcriptionally facilitating P21 expression. (PMID: 30238982) Fang C … Sun F (Journal of cellular physiology 2019) 3
Products for DGCR5 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DGCR5
- Origene Custom Protein Services for DGCR5
- Origene shrna and RNAi products in human, mouse, rat for DGCR5
- Browse OriGene Inhibitory RNA Products For DGCR5
- OriGene qPCR primer pairs for DGCR5
- Browse CRISPR knockouts for DGCR5
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For DGCR5
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- antibodies-online: Search results for available DGCR5 related products ranked by validation data
- antibodies-online: Search results for available DGCR5 related products ranked by validation data
- antibodies-online: Search results for available DGCR5 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for DGCR5
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for DGCR5
- Search GeneCopoeia for miRNA 3'UTR Target clone products for DGCR5
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for DGCR5
Sources for DGCR5 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB